API for TransBioInfoLab/coMethDMR
Accurate identification of co-methylated and differentially methylated regions in epigenome-wide association studies
| Global functions | |
|---|---|
| .AnnotateRow | Source code |
| .ExtractUCSCinfo | Source code |
| .MakeLmmFormula | Source code |
| .onLoad | Source code |
| AnnotateResults | Man page Source code |
| CloseBySingleRegion | Man page Source code |
| CoMethAllRegions | Man page Source code |
| CoMethSingleRegion | Man page Source code |
| CpGsInfoAllRegions | Man page Source code |
| CpGsInfoOneRegion | Man page Source code |
| CreateOutputDF | Man page Source code |
| CreateParallelWorkers | Man page Source code |
| CreateRdrop | Man page Source code |
| FindComethylatedRegions | Man page Source code |
| GetCpGsInRegion | Man page Source code |
| GetResiduals | Man page Source code |
| ImportSesameData | Man page Source code |
| MarkComethylatedCpGs | Man page Source code |
| MarkMissing | Man page Source code |
| NameRegion | Man page Source code |
| OrderCpGsByLocation | Man page Source code |
| RegionsToRanges | Man page Source code |
| SplitCpGDFbyRegion | Man page Source code |
| WriteCloseByAllRegions | Man page Source code |
| betaMatrix_ex1 | Man page |
| betaMatrix_ex2 | Man page |
| betaMatrix_ex3 | Man page |
| betaMatrix_ex4 | Man page |
| betasChr22_df | Man page |
| coMethDMR_setup | Man page |
| lmmTest | Man page Source code |
| lmmTestAllRegions | Man page Source code |
| pheno_df | Man page |
