ShowMeta,PathwayObject-method | R Documentation |
ShowMeta
## S4 method for signature 'PathwayObject' ShowMeta(Object)
Object |
a PathwayObject |
PathwayObject |
a PathwayObject |
dataframe of pathwayobjects
IPA.files <- c(system.file("extdata", "MM10.IPA.KO.uGvsMac.Canonical_pathways.xls", package = "GeneSetCluster"), system.file("extdata", "MM10.IPA.WT.uGvsMac.Canonical_pathways.xls", package = "GeneSetCluster"), system.file("extdata", "MM10.IPA.KO.uGvsMac.Functional_annotations.xls", package = "GeneSetCluster"), system.file("extdata", "MM10.IPA.WT.uGvsMac.Functional_annotations.xls", package = "GeneSetCluster")) canonical.files <- IPA.files[grep("Canonical", IPA.files)] IPA.object1 <- LoadGeneSets(file_location = canonical.files, groupnames= c("KO", "WT"), P.cutoff = 1.3, Mol.cutoff = 5, Source = "IPA", type = "Canonical_Pathways", structure = "SYMBOL", seperator = ",") ShowMeta(Object =IPA.object1 )
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.