TrigosTeam/spaSim: Spatial point data simulator for tissue images

A suite of functions for simulating spatial patterns of cells in tissue images. Output images are multitype point data in SingleCellExperiment format. Each point represents a cell, with its 2D locations and cell type. Potential cell patterns include background cells, tumour/immune cell clusters, immune rings, and blood/lymphatic vessels.

Getting started

Package details

Bioconductor views BiomedicalInformatics Spatial StatisticalMethod
Maintainer
LicenseArtistic-2.0
Version1.3.1
URL https://trigosteam.github.io/spaSim/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("TrigosTeam/spaSim")
TrigosTeam/spaSim documentation built on May 25, 2023, 4:20 p.m.