Files in UMMS-Biocore/dprofiler

Dprofiler:

LICENSE.md R/additionalServers.R R/additionalUI.R R/condSelect.R R/dataLoad.R R/deconvolute.R R/deprogs.R R/dprofiler.R R/funcs.R R/heatmap.R R/heatmapfunctions.R R/help.R R/iterdeprogs.R R/mainScatter.R R/mongoserver.R R/prepareInputs.R R/profiling.R R/server.R R/startShiny.R R/summariser.R R/ui.R README.md man/DBUI.Rd man/MainLoadPage.Rd man/MergeScoreTables.Rd man/ScoreCutOffSelectionUI.Rd man/SummaryUI.Rd man/UpdateMongoSearchBox.Rd man/addDataCols.Rd man/applyFiltersIter.Rd man/batchEffectUI.Rd man/condSelectUI.Rd man/connectMongo.Rd man/custom_silhouette.Rd man/cutOffSelectionUI.Rd man/dataLCFUI.Rd man/dataLoadServer.Rd man/dataProfileUI.Rd man/dataSCUI.Rd man/dataUI.Rd man/deconvolute.Rd man/display_venn.Rd man/dprofiler.Rd man/dprofilerBatch.Rd man/dprofilerFilter.Rd man/dprofilerServer.Rd man/dprofilerUI.Rd man/dprofilerbarmainplot.Rd man/dprofilerboxmainplot.Rd man/dprofilercondselect.Rd man/dprofilerdeanalysis.Rd man/dprofilerdeconvolute.Rd man/dprofilerdeconvolute_old.Rd man/dprofilerheatmap.Rd man/dprofilermainplot.Rd man/dprofilerprofiling.Rd man/dprofilersummariser.Rd man/external_silhouette.Rd man/fileSummaryBox.Rd man/fileUploadBox.Rd man/getAllMarkerGenes.Rd man/getAllProfGenes.Rd man/getAllScoreDetails.Rd man/getCCAEmbedding.Rd man/getCompCellularText.Rd man/getCompProfilingText.Rd man/getComparativeProfText.Rd man/getConditionSelectorFromMeta.Rd man/getDEResultsUI.Rd man/getDEgenesDownloadButtons.Rd man/getDataAssesmentText.Rd man/getDataMongo.Rd man/getDeconvoluteTableDetails.Rd man/getDeconvoluteUI.Rd man/getDprofilerText.Rd man/getExpressionProfiles.Rd man/getFinalScores.Rd man/getHeatmapMarkerGenes.Rd man/getIconLabel.Rd man/getIdentSelectorFromMeta.Rd man/getIntroText.Rd man/getIterDESummary.Rd man/getIterMethodDetails.Rd man/getJSLine.Rd man/getLegendColors.Rd man/getMainPlot.Rd man/getMetaSelector.Rd man/getMethodDetails.Rd man/getMethodDetails_old.Rd man/getOutlierScores.Rd man/getOutlierScores.old.Rd man/getPCAEmbedding.Rd man/getPlotArea.Rd man/getProfileSampleDetails.Rd man/getProfileScoreDetails.Rd man/getProfileScores.Rd man/getProfileSelector.Rd man/getProfilingMethodDetails.Rd man/getProfilingParameter.Rd man/getProfilingUI.Rd man/getQAText.Rd man/getReferenceProfileRNA.Rd man/getReferenceSingleCellRNA.Rd man/getSCRNAEmbedding.Rd man/getSCRNASampleDetails.Rd man/getScRNAMetaSelector.Rd man/getScoreDetails.Rd man/getTabUpdateJS.Rd man/heatmapJScode.Rd man/heatmapServer.Rd man/heatmapUI.Rd man/hideMulti.Rd man/insertDataMongo.Rd man/mainPlotControlsUI.Rd man/mainScatter.Rd man/mongoServer.Rd man/mongoServerUI.Rd man/outlier_silhouette.Rd man/prepDEparameters.Rd man/prepDataContainer_old.Rd man/prepDeconvolute_old.Rd man/profilefileUploadBox.Rd man/runDE.Rd man/runIterDE.Rd man/runLimma.Rd man/runMultipleDE.Rd man/scfileUploadBox.Rd man/selectConditions.Rd man/selectDataMongo.Rd man/selectProfilingConditions.Rd man/selectScRNAConditions.Rd man/sepRadio.Rd man/showMulti.Rd man/simulateProfilingData.Rd man/startDprofiler.Rd man/validatebulkReference.Rd man/validatescReference.Rd