FormatForSIMCA: Format Peaklists for input into SIMCA
In USEPA/LUMA: LCMS-Based Untargeted Metabolomics Assistant
View source: R/Format_Output-Modules.R
Description
Formats Peaklists processed by LUMA and exports a csv file for
direct import into the multivariate statistical software SIMCA. See
format_simca() for more details. For examples, see
InitWorkflow() and vignettes.
Usage
1
FormatForSIMCA(from.table, to.csv, peak.db, db.dir)
Arguments
from.table
from which table should LUMA read the Peaklist
to.csv
to what filename (excluding .csv extension) should LUMA save
the formatted Peaklist
peak.db
what database contains the Peaklists to be combined. Default
is "Peaklist_db".
db.dir
directory containing the database. Default is "db".
USEPA/LUMA documentation built on Aug. 29, 2020, 1:40 p.m.
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View source: R/Format_Output-Modules.R
Description
Formats Peaklists processed by LUMA and exports a csv file for
direct import into the multivariate statistical software SIMCA. See
format_simca() for more details. For examples, see
InitWorkflow() and vignettes.
Usage
1 | FormatForSIMCA(from.table, to.csv, peak.db, db.dir)
|
Arguments
from.table |
from which table should LUMA read the Peaklist |
to.csv |
to what filename (excluding .csv extension) should LUMA save the formatted Peaklist |
peak.db |
what database contains the Peaklists to be combined. Default
is |
db.dir |
directory containing the database. Default is |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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