Files in USGS-R/EGRET
Exploration and Graphics for RivEr Trends
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.github/workflows/test-coverage.yaml
.gitignore
.gitlab-ci.yml
CONDUCT.md
DESCRIPTION
DISCLAIMER.md
EGRET.Rproj
LICENSE.md
LICENSE.note
NAMESPACE
NEWS
R/EGRET.R
R/blankTime.R
R/boxConcMonth.R
R/boxConcThree.R
R/boxQTwice.R
R/boxResidMonth.R
R/calculateMonthlyResults.R
R/censoredSegments.R
R/checkStartEndDate.r
R/compressData.r
R/cumQdate.R
R/dataOverview.r
R/dateFormatCheck.r
R/egret_objects.R
R/errorStats.R
R/estCrossVal.R
R/estDailyFromSurfacesJ.R
R/estSurfaces.R
R/fixSampleFrame.R
R/flexFN.R
R/flowDuration.R
R/fluxBiasEight.R
R/fluxBiasStat.R
R/fluxUnit.R
R/generalAxis.R
R/genericEGRETplot.R
R/kalman_functions.R
R/logPretty.R
R/makeAnnualSeries.R
R/makeRandomResiduals.R
R/mergeReport.r
R/modelEstimation.R
R/multiPlotDataOverview.R
R/objectDefinitions.R
R/plot15.R
R/plot1of15.R
R/plotConcHist.R
R/plotConcPred.R
R/plotConcQ.R
R/plotConcQSmooth.R
R/plotConcTime.R
R/plotConcTimeDaily.R
R/plotConcTimeSmooth.R
R/plotContours.R
R/plotDiffContours.R
R/plotFlowSingle.R
R/plotFluxHist.R
R/plotFluxPred.R
R/plotFluxQ.R
R/plotFluxTimeDaily.R
R/plotFour.R
R/plotFourStats.R
R/plotMonthTrend.R
R/plotQTimeDaily.R
R/plotResidPred.R
R/plotResidQ.R
R/plotResidTime.R
R/plotSDLogQ.R
R/populateConcentrations.r
R/populateDaily.r
R/populateDateColumns.r
R/populateParameterINFO.r
R/populateSampleColumns.r
R/populateSiteINFO.r
R/printFluxUnitCheatSheet.R
R/printSeries.R
R/printqUnitCheatSheet.R
R/processQWData.r
R/readDataFromFile.r
R/readMetaData.r
R/readNWISDaily.r
R/readNWISSample.r
R/readUserDaily.r
R/readUserSample.r
R/readWQPSample.R
R/removeDuplicates.r
R/runGroups.R
R/runPairs.R
R/runSeries.R
R/runSurvReg.R
R/saveResults.R
R/selectDays.R
R/setPA.R
R/setSeasonLabel.R
R/setSeasonLabelByUser.R
R/setupYears.R
R/startEnd.R
R/stitch.R
R/surfaceIndex.R
R/tableChange.R
R/tableChangeSingle.R
R/tableFlowChange.R
R/tableResults.R
R/triCube.R
R/yPretty.R
README.Rmd
README.md
_pkgdown.yml
code.json
codecov.yml
data/Arkansas_eList.RData
data/Choptank_eList.RData
demo/00Index
demo/FlowHistory.R
demo/WRTDSanalysis.R
demo/checkData.R
deploy_simple.R
inst/CITATION
inst/extdata/ChoptankRiverFlow.txt
inst/extdata/ChoptankRiverNitrate.csv
inst/extdata/infoTest.csv
man/Constants.Rd
man/EGRET-package.Rd
man/INFOdataframe.Rd
man/as.egret.Rd
man/blankTime.Rd
man/boxConcMonth.Rd
man/boxConcThree.Rd
man/boxQTwice.Rd
man/boxResidMonth.Rd
man/calculateMonthlyResults.Rd
man/censoredSegments.Rd
man/checkStartEndDate.Rd
man/checkSurfaceSpan.Rd
man/cleanUp.Rd
man/compressData.Rd
man/concUnit-class.Rd
man/cumQdate.Rd
man/dataOverview.Rd
man/dateFormatCheck.Rd
man/decimalDate.Rd
man/decimalHighLow.Rd
man/errorStats.Rd
man/estCrossVal.Rd
man/estDailyFromSurfaces.Rd
man/estSurfaces.Rd
man/figures/README-contourPlots-1.png
man/figures/README-contourPlots-2.png
man/figures/README-fluxPlots-1.png
man/figures/README-multiPlot-1.png
man/figures/README-multiPlots-1.png
man/figures/README-multiPlots-2.png
man/figures/README-plotFours-1.png
man/figures/README-plotFours-2.png
man/figures/README-runModel-1.png
man/figures/README-runModel-10.png
man/figures/README-runModel-11.png
man/figures/README-runModel-2.png
man/figures/README-runModel-3.png
man/figures/README-runModel-4.png
man/figures/README-runModel-5.png
man/figures/README-runModel-6.png
man/figures/README-runModel-7.png
man/figures/README-runModel-8.png
man/figures/README-runModel-9.png
man/figures/README-startPlots-1.png
man/figures/README-startPlots-2.png
man/figures/README-startPlots-3.png
man/figures/README-startPlots-4.png
man/figures/README-unnamed-chunk-4-1.png
man/figures/README-unnamed-chunk-4-2.png
man/figures/README-unnamed-chunk-4-3.png
man/figures/README-unnamed-chunk-5-1.png
man/figures/README-unnamed-chunk-5-2.png
man/figures/README-unnamed-chunk-5-3.png
man/figures/egret-02.png
man/figures/logo.png
man/figures/table1.png
man/fixSampleFrame.Rd
man/flexFN.Rd
man/flexPlotAddOn.Rd
man/flowDuration.Rd
man/fluxBiasMulti.Rd
man/fluxBiasStat.Rd
man/fluxUnit-class.Rd
man/generalAxis.Rd
man/genericEGRETDotPlot.Rd
man/genmissing.Rd
man/getDaily.Rd
man/getInfo.Rd
man/getSample.Rd
man/getSurfaces.Rd
man/helperEGRET.Rd
man/is.egret.Rd
man/jitterSam.Rd
man/logPretty1.Rd
man/logPretty3.Rd
man/makeAnnualSeries.Rd
man/makeAugmentedSample.Rd
man/makeDateInfo.Rd
man/mergeReport.Rd
man/modelEstimation.Rd
man/monthLabel-class.Rd
man/multiPlotDataOverview.Rd
man/plot15.Rd
man/plot1of15.Rd
man/plotConcHist.Rd
man/plotConcPred.Rd
man/plotConcQ.Rd
man/plotConcQSmooth.Rd
man/plotConcTime.Rd
man/plotConcTimeDaily.Rd
man/plotConcTimeSmooth.Rd
man/plotContours.Rd
man/plotDiffContours.Rd
man/plotFlowSingle.Rd
man/plotFluxHist.Rd
man/plotFluxPred.Rd
man/plotFluxQ.Rd
man/plotFluxTimeDaily.Rd
man/plotFour.Rd
man/plotFourStats.Rd
man/plotMonthTrend.Rd
man/plotQTimeDaily.Rd
man/plotResidPred.Rd
man/plotResidQ.Rd
man/plotResidTime.Rd
man/plotSDLogQ.Rd
man/plotTimeSlice.Rd
man/plotWRTDSKalman.Rd
man/populateConcentrations.Rd
man/populateDaily.Rd
man/populateDailySamp.Rd
man/populateDateColumns.Rd
man/populateParameterINFO.Rd
man/populateSampleColumns.Rd
man/populateSiteINFO.Rd
man/printFluxUnitCheatSheet.Rd
man/printGroups.Rd
man/printPairs.Rd
man/printSeries.Rd
man/printqUnitCheatSheet.Rd
man/processQWData.Rd
man/qUnit-class.Rd
man/randomSubset.Rd
man/readDataFromFile.Rd
man/readNWISDaily.Rd
man/readNWISSample.Rd
man/readUserDaily.Rd
man/readUserSample.Rd
man/readWQPSample.Rd
man/removeDuplicates.Rd
man/runGroups.Rd
man/runPairs.Rd
man/runSeries.Rd
man/runSurvReg.Rd
man/sampleData.Rd
man/saveResults.Rd
man/selectDays.Rd
man/setPA.Rd
man/setSeasonLabel.Rd
man/setSeasonLabelByUser.Rd
man/setUpEstimation.Rd
man/setupYears.Rd
man/startEnd.Rd
man/stitch.Rd
man/surfaceIndex.Rd
man/surfaceStartEnd.Rd
man/tableChange.Rd
man/tableFlowChange.Rd
man/tableResults.Rd
man/triCube.Rd
man/wrtdsK.Rd
man/yPretty.Rd
pkgdown/assets/fonts/FontAwesome.otf
pkgdown/assets/fonts/fontawesome-webfont.eot
pkgdown/assets/fonts/fontawesome-webfont.svg
pkgdown/assets/fonts/fontawesome-webfont.ttf
pkgdown/assets/fonts/fontawesome-webfont.woff
pkgdown/assets/fonts/fontawesome-webfont.woff2
pkgdown/assets/images/logo.png
pkgdown/assets/logo.png
pkgdown/extra.css
pkgdown/favicon/favicon-16x16.png
pkgdown/favicon/favicon.ico
pkgdown/favicon/logo.png
pkgdown/logo.png
pkgdown/templates/footer.html
pkgdown/templates/header.html
tests/testthat.R
tests/testthat/Rplots.pdf
tests/testthat/helper-originaldata.R
tests/testthat/tests_calculations.R
tests/testthat/tests_estCrossVal.R
tests/testthat/tests_estDailyFromSurfaces.R
tests/testthat/tests_estSurfaces.R
tests/testthat/tests_flow_normalization.R
tests/testthat/tests_imports.R
tests/testthat/tests_modelEstimation.R
tests/testthat/tests_runSurvReg.R
tests/testthat/tests_utils.R
vignettes/AlternativeQMethod.Rmd
vignettes/Annual_Hydrograph_Timing.Rmd
vignettes/ChainBridge.TP.RData
vignettes/Compare_QW_and_UV.Rmd
vignettes/Conowingo.PO4.RData
vignettes/EGRET.Rmd
vignettes/Enhancements.Rmd
vignettes/Exported_Items.bib
vignettes/Join_closest.Rmd
vignettes/Overview.Rmd
vignettes/References_WRTDS.Rmd
vignettes/SeasonalFraction.Rmd
vignettes/TrendsByMonth.Rmd
vignettes/WRTDSK.Rmd
vignettes/css/stylesSlides.css
vignettes/dataPreperation.Rmd
vignettes/eListColumbia.RData
vignettes/eListMerced.RData
vignettes/eListMiss.RData
vignettes/eListOut.rds
vignettes/helper_functions.R
vignettes/img/simple-shadow.png
vignettes/img/stylesSlides.css
vignettes/img/usgs.png
vignettes/logo.png
vignettes/pairResults.rds
vignettes/pairResults2.rds
vignettes/parallel.Rmd
vignettes/rResid.Rmd
vignettes/streamflow_trend.Rmd
vignettes/table1.png
vignettes/units.Rmd
