getAbundances: Get data.table of abundances from AbundanceData
In VEuPathDB/microbiomeComputations: Compute Results for Microbiome Analyses
getAbundances R Documentation
Get data.table of abundances from AbundanceData
Description
Returns a data.table of abundances, respecting the
imputeZero slot.
Usage
getAbundances(
object,
ignoreImputeZero = c(FALSE, TRUE),
includeIds = c(TRUE, FALSE),
verbose = c(TRUE, FALSE)
)
Arguments
object
AbundanceData
ignoreImputeZero
boolean indicating whether we should respect the imputeZero slot
includeIds
boolean indicating whether we should include recordIdColumn and ancestorIdColumns
Value
data.table of abundances
VEuPathDB/microbiomeComputations documentation built on March 1, 2024, 7:21 a.m.
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| getAbundances | R Documentation |
Get data.table of abundances from AbundanceData
Description
Returns a data.table of abundances, respecting the
imputeZero slot.
Usage
getAbundances(
object,
ignoreImputeZero = c(FALSE, TRUE),
includeIds = c(TRUE, FALSE),
verbose = c(TRUE, FALSE)
)
Arguments
object |
AbundanceData |
ignoreImputeZero |
boolean indicating whether we should respect the imputeZero slot |
includeIds |
boolean indicating whether we should include recordIdColumn and ancestorIdColumns |
Value
data.table of abundances
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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