BRENDAAncestors: BRENDAAncestors
In Vanessa104/devsig: Development testing
Description
Usage
Arguments
Value
Examples
Description
Get all the ancestors of a term. Parents of its parents will
be retrieved. Based on 'get_ancestors()' function in 'ontologyIndex'
updated 07/2020
Usage
1
BRENDAAncestors(x, obo = BRENDAobo)
Arguments
x
A BRENDA term id, term name, or synonym of a term
obo
Optional. The ontology file. BRENDA OBO file will be loaded if not provided.
Value
If input is a valid BRENDA term, return a dataframe of the term ids
and term names of the input's ancestors.
Examples
1
2
3
BRENDAAncestors("BTO:0000034")
BRENDAAncestors("SUM149 cell") # synonym; function will change it to the current name
BRENDAAncestors("BTO:0000216") # input valid but no result, gives character0
Vanessa104/devsig documentation built on Oct. 9, 2020, 2:28 a.m.
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Description Usage Arguments Value Examples
Description
Get all the ancestors of a term. Parents of its parents will be retrieved. Based on 'get_ancestors()' function in 'ontologyIndex' updated 07/2020
Usage
1 | BRENDAAncestors(x, obo = BRENDAobo)
|
Arguments
x |
A BRENDA term id, term name, or synonym of a term |
obo |
Optional. The ontology file. BRENDA OBO file will be loaded if not provided. |
Value
If input is a valid BRENDA term, return a dataframe of the term ids and term names of the input's ancestors.
Examples
1 2 3 | BRENDAAncestors("BTO:0000034")
BRENDAAncestors("SUM149 cell") # synonym; function will change it to the current name
BRENDAAncestors("BTO:0000216") # input valid but no result, gives character0
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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