Description Usage Arguments Value
Compute the enrichment score for a list of motifs in the foreground set as compared to the background set
1 2 | get_motif_score(x, idx_select, motif_list, showProgress = TRUE,
match_central_letter = TRUE)
|
x |
a vector of sequences (with a fixed length). Defined as the background set |
idx_select |
Indexes of foreground sequences in |
motif_list |
list of motifs |
showProgress |
show progress bar in console |
match_central_letter |
keep only sequences that have the same central letter as the motif |
A data frame summarizing motif enrichment analysis in foreground set
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