Description Usage Arguments Value See Also
In a tree(e.g. a hierarchical structure for some species) represtented
by a nested dataframe. children
lists the children of whose
.
Events (pathways and reactions) in Reactome are organised in a hierarchical structure for every species. By following all 'hasEvent' relationships, this method retrieves the full event hierarchy for any given species. The result is a list of tree structures, one for each TopLevelPathway. Every event in these trees is represented by a PathwayBrowserNode. The latter contains the stable identifier, the name, the species, the url, the type, and the diagram of the particular event.
1 2 3 4 5 | children(whose, where, key = "stId")
reactomeEventHierarchy(species = "9606", silent = FALSE)
rtEventHierarchy(species = "9606", silent = FALSE)
|
whose |
string. an idendifier indicating |
where |
list. the list tree including |
key |
string. name we search depends on |
species |
string. Allowed species filter: SpeciesName (eg: Homo sapiens) SpeciesTaxId (eg: 9606) |
silent |
logical. Whether print error messages on the screen. |
A data frame.
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