ENIGMA-class: The ENIGMA Class

ENIGMA-classR Documentation

The ENIGMA Class

Description

The ENIGMA Class

Slots

raw_input

raw bulk and reference data

ref_type

the reference type

bulk

bulk matrix after batch correction

ref

reference matrix after batch correction

result_cell_proportion

the proportion of each cell types in bulk samples

result_CSE

inferred cell type-specific expression (CSE)

result_CSE_normalized

inferred (normalized) cell type-specific expression (CSE)


WWXkenmo/ENIGMA_test documentation built on March 17, 2023, 4:56 a.m.