se.DM | R Documentation |
This function generates LME4 input.
se.DM(se, weightByLL = TRUE)
se |
A SummarizedExperiment object containing FPKM values and at least one annotation column. |
weightByLL |
Logical, weigh by log likelihood score. |
This function converts SummarizedExperiment object.
Returns LME4 input.
AJ Vaestermark, JR Walters.
The "doseR" package, 2018 (in press).
data(hmel.se)
f_se <- quantFilter(se, lo.bound = 0.4, hi.bound = 0.5)
dm <- se.DM(f_se)
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