Files in Wang-Cankun/rDeepMAPS

IRIS3-api

CODE_OF_CONDUCT.md LICENSE.md NEWS.md R/app_entry.R R/app_filter.R R/cellchat_service.R R/class.R R/cluster_service.R R/data.R R/deg_service.R R/enrichment_service.R R/hello_service.R R/internal.R R/iris3api-package.R R/load_service.R R/object.R R/object_service.R R/qc_service.R R/read_file.R R/regulon_service.R R/seurat_util.R R/socket_service.R R/util.R R/utils-pipe.R R/visual_service.R README.Rmd README.md app.R data-raw/DATASET.R index.Rmd inst/endpoints/plumber.R man/AssociatedDimReducs.Rd man/BinMean.Rd man/DefaultDimReduc.Rd man/UploadInfo-class.Rd man/active_label.Rd man/adt_qc_list.Rd man/atac_qc_list.Rd man/calc_deg.Rd man/calc_dr.Rd man/calc_enrichr_table.Rd man/calc_gsea_table.Rd man/calc_regulon_gsea_table.Rd man/calc_regulon_network.Rd man/check_package.Rd man/cluster_coords.Rd man/cluster_multiome.Rd man/cluster_multiome2.Rd man/cluster_single_rna.Rd man/convert_empty.Rd man/coverage_plot.Rd man/create_uploadinfo_object.Rd man/detect_delim.Rd man/disconnect_socketio.Rd man/echo_back.Rd man/example_cluster_coords.Rd man/example_dr1.Rd man/example_dr_figure.Rd man/example_gas.Rd man/example_ras.Rd man/example_ri_heatmap.Rd man/example_ri_heatmap2.Rd man/feature_coords.Rd man/gene_cor_plot.Rd man/gene_umap_plot.Rd man/get_all_assays.Rd man/get_all_embeddings.Rd man/get_all_genes.Rd man/get_all_idents.Rd man/get_base_dir.Rd man/get_gene_range.Rd man/getdata.Rd man/hello_name.Rd man/ifnb_2800.Rd man/init_socketio.Rd man/interactive_heatmap.Rd man/iris3api-package.Rd man/is_matrix_empty.Rd man/list_regulon_network.Rd man/load_citeseq.Rd man/load_multi_rna.Rd man/load_multiome.Rd man/load_multiome2.Rd man/load_multiome3.Rd man/load_multiome4.Rd man/load_single_rna.Rd man/log_request.Rd man/merge_idents.Rd man/pipe.Rd man/plot_cellchat.Rd man/plot_enrichr_bar.Rd man/plot_enrichr_dot.Rd man/plot_gsea.Rd man/plot_histogram.Rd man/print_wd.Rd man/read_deepmaps.Rd man/read_deepmaps_h5.Rd man/read_deepmaps_text.Rd man/rename_idents.Rd man/rna_qc_list.Rd man/rna_qc_plot.Rd man/run_cellchat.Rd man/select_category.Rd man/select_cells.Rd man/send_progress.Rd man/set_assay.Rd man/set_embedding.Rd man/set_idents.Rd man/set_if_not_null.Rd man/set_if_null.Rd man/set_obj.Rd man/start_debug_server.Rd man/start_server.Rd man/static_heatmap.Rd man/style_and_lint.Rd man/subset_cells.Rd man/sum_numbers.Rd man/umap_plot.Rd man/violin_gene_plot.Rd man/yan_2013.Rd man/zeisel_2015.Rd tests/spelling.R tests/testthat.R tests/testthat/test-api.R tests/testthat/test-class.R tests/testthat/test-object.R tests/testthat/test-sample.R vignettes/iris3api.Rmd vignettes/regulon.rmd vignettes/signac.rmd