updateObject: Update Object
In WeiSong-bio/roryk-bcbioRNASeq: RNA-Seq Utilities

Description Usage Arguments Value Legacy bcbioRNADataSet class Legacy objects created with bcbioRnaseq Author(s) See Also Examples

Update old objects created by the bcbioRNASeq package. The session information metadata is preserved from the time when the bcbio data was originally loaded into R.

1 2	## S4 method for signature 'bcbioRNASeq' updateObject(object, rowRanges)

`object`	Object.
`rowRanges`	`GRanges` object that defines the row annotations. Since we converted to `RangedSummarizedExperiment` in v0.2.0, this option had to be added to enable updating of newly required `rowRanges()` slot.

bcbioRNASeq.

Legacy `bcbioRNADataSet` class

Support for bcbioRNADataSet objects was dropped in v0.2.0 of the package. If you need to load one of these objects, please install an older release.

Legacy objects created with `bcbioRnaseq`

The previous bcbioRnaseq package (note case) must be reinstalled to load objects from versions <= 0.0.20. We changed the name of the package to bcbioRNASeq starting in v0.0.21.

Michael Steinbaugh

Other S4 Class Definition: [,bcbioRNASeq,ANY,ANY,ANY-method, bcbioRNASeq, coerce, show