Man pages for WeiqiangZhou/SINTER
Single-cell genomic data integration
| cluster_regression_topn | Linear regression function based on sure independence... |
| ENCLfunc | Summarize single-cell ATAC-seq data according to ENCODE... |
| eval_neighbor_test | Evaluate the spacial discribution of the mixed single cells... |
| mnn_opt | Search for the optimal parameters for MNN |
| neighbor_test | Evaluate the spacial discribution of the mixed single cells... |
| neighbor_test_fast | Evaluate the spacial discribution of the mixed single cells... |
| predict_opt | Search for the optimal parameters for SINTER |
| pre_model | Prediction of ENCODE cluster features based on scRNA-seq data |
| run_MNN | Run MNN to correct for platform effects |
| select_DHS_cluster | Select variable ENCODE cluster features from scATAC-seq data |
| select_gene | Select variable gene from single-cell RNA-seq data |
