cluster_regression_topn: Linear regression function based on sure independence...

In WeiqiangZhou/SINTER: Single-cell genomic data integration

Description

This function is used for building linear regression models based on the top N predictors that are most correlated with reponse.

Usage

cluster_regression_topn(DNase_train, RNA_train_mean, RNA_test_mean, top_n)

Arguments

DNase_train	ENCODE cluster features from DNase-seq data for building the regression model.
RNA_train_mean	Gene cluster mean from ENCODE RNA-seq data for building the regression model.
RNA_test_mean	Gene cluster mean from scRNA-seq data for making predictions.
top_n	Number of predictors used in the regression model.

Value

y_pre

A vector of predicted ENCODE cluster features.

WeiqiangZhou/SINTER documentation built on Sept. 11, 2019, 8:03 a.m.