Man pages for WilliamSalvidge/dictyChipSeq
What the Package Does (One Line, Title Case)
| add_broadPeak_columnNames | add broadPeak file column names to a GRanges object |
| addExpValueAndSample | addExpValueAndSample |
| addExtraAnnotation | addExtraAnnotation |
| addGeneIdToIndex | addGeneIdToIndex |
| add_narrowPeak_columnNames | add narrowPeak file column names to a GRanges object |
| annotatePeaksSeq | annotatePeaksSeq |
| dropDictyChromosomes | dropDictyChromsomes |
| getTagMatricesForDiffExpLevelBins | getTagMatricesForDiffExpLevelBins |
| getTagMatrixWill | getTagMatrixWill |
| mainPipeLine | mainPipeLine |
| makeAx4TPM | makeAx4TPM |
| makeDictyGenes | makeDictyGenesGRangesObject |
| makeDictyGrangesfromTxDb | makeDictyGrangesfromTxDb |
| makeDictyPromotersGrangesObject | makeDictyPromotersGrangesObject |
| plotFunctionWillDictyChip | plotFunctionWillDictyChip |
| rearrangeTagMatricesBasedOnSample | rearrangeTagMatricesBasedOnSample |
| selectPromoterGRangesBasedOnTagMatrixIndex | selectPromoterGRangesBasedOnTagMatrixIndex |
| set1DegOverlapNumbers | Title |
| SplitIntoBins | SplitIntoBins |
