scAnnotator.Seurat: Automatic annotation of cell types using Seurat label...
In WubingZhang/scAnalyzer: Integrative analysis pipeline for analyzing single-cell RNA-seq data
View source: R/scAnnotator.Seurat.R
scAnnotator.Seurat R Documentation
Automatic annotation of cell types using Seurat label transfer
Description
Automatic annotation of cell types using Seurat label transfer
Usage
scAnnotator.Seurat(query.obj, ref.obj, norm.method = "SCT")
Arguments
query.obj
A seurat object for querying
ref.obj
A seurat object as reference
norm.method
SCT or LogNormalize
Value
A data frame with Seurat prediction scores.
Author(s)
Wubing Zhang
WubingZhang/scAnalyzer documentation built on Jan. 30, 2023, 10:11 p.m.
R Package Documentation
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View source: R/scAnnotator.Seurat.R
| scAnnotator.Seurat | R Documentation |
Automatic annotation of cell types using Seurat label transfer
Description
Automatic annotation of cell types using Seurat label transfer
Usage
scAnnotator.Seurat(query.obj, ref.obj, norm.method = "SCT")
Arguments
query.obj |
A seurat object for querying |
ref.obj |
A seurat object as reference |
norm.method |
SCT or LogNormalize |
Value
A data frame with Seurat prediction scores.
Author(s)
Wubing Zhang
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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