MicrobiomeProfiler
is an R-shiny package based on clusterProfiler
,
is user-friendly tool for functional enrichment analysis in microbiome
data (T Wu, et al., 2021).
Installation via BiocManager:
if (!require("BiocManager"))
install.packages("BiocManager")
BiocManager::install("MicrobiomeProfiler")
Or install MicrobiomeProfiler
from github using devtools :
## Note that having installed clusterProfiler,config,DT,enrichplot,golem,magrittr,shiny,shinyWidgets,shinycustomloader,htmltools,ggplot2
if (!requireNamespace("devtools", quietly=TRUE))
install.packages("devtools")
devtools::install_github("YuLab-SMU/MicrobiomeProfiler")
library(MicrobiomeProfiler)
run_MicrobiomeProfiler()
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.