YuLab-SMU/MicrobiomeProfiler: An R/shiny package for microbiome functional enrichment analysis

This is an R/shiny package to perform functional enrichment analysis for microbiome data. This package was based on clusterProfiler. Moreover, MicrobiomeProfiler support KEGG enrichment analysis, COG enrichment analysis, Microbe-Disease association enrichment analysis, Metabo-Pathway analysis.

Getting started

Package details

Bioconductor views KEGG Microbiome Software Visualization
Maintainer
LicenseGPL-2
Version1.11.1
URL https://github.com/YuLab-SMU/MicrobiomeProfiler/ https://yulab-smu.top/contribution-knowledge-mining/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("YuLab-SMU/MicrobiomeProfiler")
YuLab-SMU/MicrobiomeProfiler documentation built on Aug. 19, 2024, 6:58 a.m.