Man pages for YuLab-SMU/MicrobiomeProfiler
An R/shiny package for microbiome functional enrichment analysis
| enrichCOG | COG enrichment analysis for microbiome data |
| enrichHMDB | Metabolism enrichment analysis for microbiome data |
| enrichKO | KO enrichment for microbiome data |
| enrichMBKEGG | Metabolism enrichment analysis for microbiome data |
| enrichMDA | Microbe-Disease associations enrichment analysis |
| enrichModule | Module enrichment for microbiome data |
| enrichSMPDB | Metabolism enrichment analysis for microbiome data |
| gson_cpd | gson_cpd |
| gson_enzyme | gson_enzyme |
| gson_KO | gson_KO |
| gson_module | gson_module |
| MicrobiomeProfiler-package | Functional enrichment analysis for microbiome data |
| microbiota_taxlist | Example data: a vector of 54 bacterial genera tested for... |
| Psoriasis_data | Example data: a vector of 134 significantly different... |
| Rat_data | Example data: a vector of 91 KEGG Orthologies (KOs) showing... |
| run_MicrobiomeProfiler | Run the Shiny Application |
