plotGOgraph: plotGOgraph
In YuLab-SMU/clusterProfiler: A universal enrichment tool for interpreting omics data
plotGOgraph R Documentation
plotGOgraph
Description
plot GO graph
Usage
plotGOgraph(
x,
firstSigNodes = 10,
useInfo = "all",
sigForAll = TRUE,
useFullNames = TRUE,
...
)
Arguments
x
output of enrichGO or gseGO
firstSigNodes
number of significant nodes (retangle nodes in the graph)
useInfo
additional info
sigForAll
if TRUE the score/p-value of all nodes in the DAG is shown, otherwise only score will be shown
useFullNames
logical
...
additional parameter of showSigOfNodes, please refer to topGO
Value
GO DAG graph
Author(s)
Guangchuang Yu
YuLab-SMU/clusterProfiler documentation built on Dec. 3, 2024, 1:32 p.m.
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| plotGOgraph | R Documentation |
plotGOgraph
Description
plot GO graph
Usage
plotGOgraph(
x,
firstSigNodes = 10,
useInfo = "all",
sigForAll = TRUE,
useFullNames = TRUE,
...
)
Arguments
x |
output of enrichGO or gseGO |
firstSigNodes |
number of significant nodes (retangle nodes in the graph) |
useInfo |
additional info |
sigForAll |
if TRUE the score/p-value of all nodes in the DAG is shown, otherwise only score will be shown |
useFullNames |
logical |
... |
additional parameter of showSigOfNodes, please refer to topGO |
Value
GO DAG graph
Author(s)
Guangchuang Yu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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