Description Usage Arguments Details Value Author(s) Examples
BioCyc Database Additional API - Get the NCBI taxonomy ID from a given BioCyc ID
1 | PhyloCyc2NCBI(speID)
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speID |
The BioCyc species ID, for example "ECOLI" is for "Escherichia coli K-12 substr. MG1655". |
NCBI taxonomy ID is used as unique ID accoss cyc and BioCyc databases. This functions is used to get the corresponding NCBI Taxonomy ID from BioCyc. If BioCyc has no official NCBI taxonomy ID, it will return a character with length of 0 (it looks like "").
The corresponding NCBI Taxonomy ID.
Yulong Niu yulong.niu@hotmail.com
1 2 3 4 | ## get human, mouse, and Ecoli NCBI taxonomy ID.
PhyloCyc2NCBI('HUMAN')
PhyloCyc2NCBI('MOUSE')
PhyloCyc2NCBI('ECOLI')
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