Plot_Seq_depth: Bar Plot of total sequencing depth.

Description Usage Arguments Value

View source: R/Plot_Seq_depth.R

Description

Plot_Seq_depth is an internal function used to generate a sequencing depth plot given an input SummarizedExperiment object.

Usage

1
Plot_Seq_depth(SE_M, HDER)

Arguments

SE_M

A SummarizedExperiment object with 2 necessary columns in colData: c( "IP_input", "SRR_RUN" ).

HDER

Determine the content of the title and the file name of the plot saved.

Value

A pdf diagram saved under the current working directory.


ZhenWei10/meripQC documentation built on April 18, 2018, 9:37 p.m.