mantel.genus2meta: Test the correlation of two matrix using the mantel function...
In ZhonghuiGai/veganEx:
Description
Usage
Arguments
Value
Author(s)
Examples
View source: R/mantel.genus2meta.R
Description
Test the correlation of two matrix using the mantel function in the vegan package
Usage
1
mantel.genus2meta(genusdata, metadata, method = "pearson", perm = 999)
Arguments
genusdata
the OTU table
metadata
the metadata
method
method to be used for correlation analysis, one of pearson and spearman, the default value is pearson
perm
the permutation value, default value is 999
Value
a ggplot object
Author(s)
Zhonghui Gai
Examples
1
mantel.genus2meta(iris[,1:2], iris[,3:4])
ZhonghuiGai/veganEx documentation built on Dec. 18, 2021, 9:20 p.m.
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Description Usage Arguments Value Author(s) Examples
View source: R/mantel.genus2meta.R
Description
Test the correlation of two matrix using the mantel function in the vegan package
Usage
1 | mantel.genus2meta(genusdata, metadata, method = "pearson", perm = 999)
|
Arguments
genusdata |
the OTU table |
metadata |
the metadata |
method |
method to be used for correlation analysis, one of pearson and spearman, the default value is pearson |
perm |
the permutation value, default value is 999 |
Value
a ggplot object
Author(s)
Zhonghui Gai
Examples
1 | mantel.genus2meta(iris[,1:2], iris[,3:4])
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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