Files in a-parton/CTStepTurn

Fitting the continuous-time step-and-turn movement model

CTStepTurn.Rproj

DESCRIPTION

FixedConstants.R InitialPath.R

LICENSE

NAMESPACE

R/calc_loc_dist.R R/calc_step_dist.R R/choose_path_section.R R/param.R R/refined_path.R R/sim_brownian.R R/sim_markov.R README.md

_config.yml

examples/calc_cond_step_dist.R examples/calc_markov_post_param.R examples/calc_markov_steady_state.R examples/calc_markov_suff_stats.R examples/calc_reverse_markov_gen.R examples/calc_step_lik.R examples/create_behav_proc_from_refined.R examples/create_refined_behavs.R examples/create_refined_times.R examples/draw_random_path_section.R examples/sim_brownian_backward.R examples/sim_brownian_bridge.R examples/sim_brownian_forward.R examples/sim_markov_backward.R examples/sim_markov_bridge.R examples/sim_markov_forward.R examples/update_bearing_param.R examples/update_behav_param.R examples/update_speed_param.R man/Gibbs_update_obs_error_param.Rd man/MH_update_obs_error_param.Rd man/calc_cond_step_dist.Rd man/calc_dist_OU_backward.Rd man/calc_dist_OU_bridge.Rd man/calc_dist_OU_forward.Rd man/calc_dist_step_backward.Rd man/calc_dist_step_bridge.Rd man/calc_dist_step_forward.Rd man/calc_dist_true_locs_backward.Rd man/calc_dist_true_locs_forward.Rd man/calc_error_lik.Rd man/calc_markov_post_param.Rd man/calc_markov_steady_state.Rd man/calc_markov_suff_stats.Rd man/calc_reverse_markov_gen.Rd man/calc_step_dist.Rd man/calc_step_lik.Rd man/check_valid_markov.Rd man/create_behav_proc_from_refined.Rd man/create_refined_behavs.Rd man/create_refined_times.Rd man/draw_random_path_section.Rd man/set_current_values.Rd man/set_fixed_values.Rd man/sim_brownian_backward.Rd man/sim_brownian_bridge.Rd man/sim_brownian_forward.Rd man/sim_markov_backward.Rd man/sim_markov_bridge.Rd man/sim_markov_forward.Rd man/sim_steps.Rd man/update_bearing_param.Rd man/update_behav_param.Rd man/update_refined_path.Rd man/update_speed_param.Rd

multi_simulation/behav_proc.txt

multi_simulation/hmm.R

multi_simulation/observations.txt

multi_simulation/plot_results/plot.Rnw

multi_simulation/plot_results/qacf.R multi_simulation/script.R

multi_simulation/sim_path.txt

single_reindeer_error/observations.txt

single_reindeer_error/plot_results/plot.Rnw

single_reindeer_error/plot_results/qacf.R single_reindeer_error/script.R

single_simulation/observations.txt

single_simulation/plot_results/plot.Rnw

single_simulation/plot_results/qacf.R single_simulation/script_half.R single_simulation/script_obs.R single_simulation/script_one.R single_simulation/script_sim.R

single_simulation/simulated_path.txt

single_simulation_error/.Rhistory

single_simulation_error/noisy_observations.txt

single_simulation_error/plot_results/plot.Rnw

single_simulation_error/plot_results/qacf.R single_simulation_error/script_0.R single_simulation_error/script_10.R single_simulation_error/script_15.R single_simulation_error/script_20.R single_simulation_error/script_25.R single_simulation_error/script_30.R single_simulation_error/script_35.R single_simulation_error/script_40.R single_simulation_error/script_45.R single_simulation_error/script_5.R single_simulation_error/script_50.R

single_simulation_error/simulated_path.txt

single_simulation_error/true_observations.txt

a-parton/CTStepTurn documentation built on May 14, 2019, 4:17 p.m.