Man pages for a-parton/CTStepTurn
Fitting the continuous-time step-and-turn movement model
| calc_cond_step_dist | OU Conditional distribution. |
| calc_dist_OU_backward | Calculate reverse-time OU distribution. |
| calc_dist_OU_bridge | Calculate OU bridge distribution. |
| calc_dist_OU_forward | Calculate OU distribution. |
| calc_dist_step_backward | Step distribution of a path section (correlated steps, start... |
| calc_dist_step_bridge | Step distribution of a path section (correlated steps, middle... |
| calc_dist_step_forward | Step distribution of a path section (correlated steps, end... |
| calc_dist_true_locs_backward | Calculate distribution of fixed locations (but in reverse... |
| calc_dist_true_locs_forward | Calculate distribution of fixed locations. |
| calc_error_lik | Calculate observation error (correlated) likelihood |
| calc_markov_post_param | Conditional posterior distribution of Markov chain. |
| calc_markov_steady_state | Markov chain equilibrium distribution. |
| calc_markov_suff_stats | Calculate Markov chain sufficient statistics. |
| calc_reverse_markov_gen | Calculate the generator matrix of a Markov chain in reverse... |
| calc_step_dist | Step distribution of a path section (independent steps). |
| calc_step_lik | Step likelihood. |
| check_valid_markov | Check Markov chain is valid. |
| create_behav_proc_from_refined | Create behavioural switch times and states. |
| create_refined_behavs | Create refined behaviours. |
| create_refined_times | Create refined time scale. |
| draw_random_path_section | Draw a random path section. |
| Gibbs_update_obs_error_param | Simulate observation error (independent) parameter. |
| MH_update_obs_error_param | Simulate observation error (correlated) parameters. |
| set_current_values | Identify current values relating to a chosen path section. |
| set_fixed_values | Identify fixed values relating to a chosen path section. |
| sim_brownian_backward | Simulate reverse-time Brownian motion. |
| sim_brownian_bridge | Simulate Brownian bridge. |
| sim_brownian_forward | Simulate Brownian motion. |
| sim_markov_backward | Simulate Markov chain backwards in time. |
| sim_markov_bridge | Simulate Markov chain bridge. |
| sim_markov_forward | Simulate Markov chain. |
| sim_steps | Simulate conditional steps. |
| update_bearing_param | Simulate bearing parameters. |
| update_behav_param | Simulate behaviour parameters. |
| update_refined_path | Update a given section of the refined path. |
| update_speed_param | Simulate speed parameters. |
