API for a-thind/PathAnalyser
ER & HER2 Pathway Activity Analysis For Breast Cancer Transcriptomic Datasets
| Global functions | |
|---|---|
| ER_GEO_microarr | Man page |
| ER_SET_sig | Man page |
| ER_TCGA_RNAseq | Man page |
| HER2_GEO_microarr | Man page |
| HER2_Smid_sig | Man page |
| HER2_TCGA_RNAseq | Man page |
| calculate_accuracy | Man page Source code |
| check_sig_df | Source code |
| check_signature_vs_dataset | Man page Source code |
| classes_pca | Man page Source code |
| classify | Source code |
| classify_gsva_abs | Man page Source code |
| classify_gsva_percent | Man page Source code |
| duplicate_genes | Source code |
| duplicate_samples | Source code |
| gsva_scores_dist | Man page Source code |
| log_cpm_transform | Man page Source code |
| pam50 | Man page |
| read_expression_data | Man page Source code |
| read_sig_file | Source code |
| read_signature | Man page Source code |
| run_gsva | Source code |
