likelihoodFuncBoonah: likelihood function
In aaronm70/batMods: fitsSEIR
Description
Usage
Arguments
Value
View source: R/likelihoodFunc.R
Description
likelihood function
Usage
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likelihoodFuncBoonah(
parms,
N,
k_PpSp,
k_PnSp,
k_PpSn,
k_PnSn,
S,
I,
Ia,
E,
R,
PCR,
time,
assump = "EIR",
urPredDat
)
Arguments
parms
parameter values
N
observed total population
I
total infected
Ia
infected adult males and adult females
E
total exposed/latent
R
total recovered
PCR
observed PCR positive counts - out of N
time
week of the year 1-52 for seasonal information
urPredDat
predicted values for under roost from GAM
k
observed sero positive
SN
total susceptable
Value
log-likelihood value
aaronm70/batMods documentation built on Sept. 8, 2021, 7:05 a.m.
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Description Usage Arguments Value
View source: R/likelihoodFunc.R
Description
likelihood function
Usage
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 | likelihoodFuncBoonah(
parms,
N,
k_PpSp,
k_PnSp,
k_PpSn,
k_PnSn,
S,
I,
Ia,
E,
R,
PCR,
time,
assump = "EIR",
urPredDat
)
|
Arguments
parms |
parameter values |
N |
observed total population |
I |
total infected |
Ia |
infected adult males and adult females |
E |
total exposed/latent |
R |
total recovered |
PCR |
observed PCR positive counts - out of N |
time |
week of the year 1-52 for seasonal information |
urPredDat |
predicted values for under roost from GAM |
k |
observed sero positive |
SN |
total susceptable |
Value
log-likelihood value
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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