API for abichat/zazou
Z-Scores As Ornstein-Uhlenbeck
| Global functions | |
|---|---|
| add_ci_pv | Source code |
| age | Man page |
| alcohol | Man page |
| as_shiftconf | Man page Source code |
| as_shiftpunct | Man page Source code |
| bic | Man page Source code |
| calculate_Z | Man page Source code |
| calculate_Z_column_with_best_lambda | Man page Source code |
| calculate_Z_with_best_lambda | Man page Source code |
| check_selection | Man page Source code |
| chlamydiae | Man page |
| choose_best_lambda | Man page Source code |
| compute_OF_lasso | Source code |
| compute_OF_scaledlasso | Source code |
| compute_gradient_function | Man page Source code |
| compute_objective_function | Man page Source code |
| confint_colwiseinverse | Man page Source code |
| confint_scoresystem | Man page Source code |
| correct_pvalues | Man page Source code |
| corresponding_edges | Source code |
| covarianceOU_matrix | Man page Source code |
| covariance_noise_matrix_colwiseinverse | Man page Source code |
| covariance_noise_matrix_scoresystem | Man page Source code |
| create_clusters | Man page Source code |
| create_listopt_pms | Man page Source code |
| df_conf_leaves | Man page Source code |
| df_confint_pvalue | Man page Source code |
| estimate_confint | Man page Source code |
| estimate_shifts | Man page Source code |
| estimate_tstar | Man page Source code |
| extract_models | Man page Source code |
| extract_significant_leaves | Man page Source code |
| extract_significant_leaves.NULL | Man page Source code |
| extract_significant_leaves.shiftconf | Man page Source code |
| extract_significant_leaves.shiftpunct | Man page Source code |
| fast_solve_colwiseinverse_col | Man page Source code |
| find_feasible | Man page Source code |
| fitch | Man page Source code |
| force_ultrametric | Man page Source code |
| generate_gamma | Man page Source code |
| get_lambda_sequence | Man page Source code |
| incidence_matrix | Man page Source code |
| init_incidence_matrix | Source code |
| inverse_sqrt | Man page Source code |
| lambda_grid | Man page Source code |
| loglikelihood | Man page Source code |
| noise_factor_colwiseinverse | Man page Source code |
| noise_factor_scoresystem | Man page Source code |
| norm0 | Man page Source code |
| open_doc | Man page Source code |
| p2z | Man page |
| pbic | Man page Source code |
| plot.shiftconf | Man page Source code |
| plot.shiftpunct | Man page Source code |
| plot_shifts | Man page Source code |
| print.shiftconf | Man page Source code |
| print.shiftpunct | Man page Source code |
| pull_pvalues | Man page Source code |
| pull_pvalues.shiftconf | Man page Source code |
| pull_pvalues.shiftpunct | Man page Source code |
| recursion_up | Source code |
| rescale_score_system | Man page Source code |
| rmse_glmnet | Man page Source code |
| simu_zscores | Man page Source code |
| smooth_pvalues | Man page Source code |
| solve_colwiseinverse | Man page Source code |
| solve_lbfgsb | Source code |
| solve_multivariate | Man page Source code |
| solve_scaled_lasso | Man page Source code |
| solve_univariate | Man page Source code |
| test_fisher | Man page Source code |
| test_kruskalwallis | Man page Source code |
| test_wilcoxon | Man page Source code |
| tree_height | Man page Source code |
| update_beta_colwiseinverse | Man page Source code |
| update_beta_scoresystem | Man page Source code |
| update_cell | Source code |
| update_confint | Man page Source code |
| update_incidence_matrix | Source code |
| update_sigma | Man page Source code |
| zazou | Man page |
| zazou-package | Man page |
