API for acidgenomics/AcidBase
Acid Genomics Base Functions

Global functions
.abort Source code
.alert Source code
.alertWarning Source code
.extractLocal Source code
.hasLocal Source code
.isLocalCall Source code
.normalizePath Source code
.rank Source code
.toInlineString Source code
AcidBase Man page
AcidBase-package Man page
addToPathEnd Man page Source code
addToPathStart Man page Source code
appendToBody Man page Source code
barcodePattern Man page
basenameSansExt Man page Source code
classContains Man page Source code
coerceToList Man page
coerceToList,Annotated-method Man page
collapseToPathString Man page Source code
compress Man page Source code
decompress Man page Source code
defunct Man page
dots Man page Source code
download Man page Source code
euclidean Man page
euclidean,numeric,numeric-method Man page
fileDepth Man page Source code
fileExt Man page Source code
foldChangeToLogRatio Man page
foldChangeToLogRatio,numeric-method Man page
forceDetach Man page Source code
genomeMetadataNames Man page
geometricMean Man page
geometricMean,AsIs-method Man page
geometricMean,matrix-method Man page
geometricMean,numeric-method Man page
gitBranch Man page
gitCurrentBranch Man page Source code
gitDefaultBranch Man page Source code
headtail Man page
headtail,data.frame-method Man page
headtail,list-method Man page
headtail,matrix-method Man page
headtail,vector-method Man page
initDir Man page Source code
intersectAll Man page
intersectAll,list-method Man page
intersectionMatrix Man page
intersectionMatrix,DataFrame-method Man page
intersectionMatrix,data.frame-method Man page
intersectionMatrix,list-method Man page
intersectionMatrix,matrix-method Man page
lanePattern Man page
logRatio Man page
logRatioToFoldChange Man page
logRatioToFoldChange,numeric-method Man page
majorVersion Man page Source code
matchArgsToDoCall Man page Source code
metadataDenylist Man page
methodDefinition Man page
methodFormals Man page Source code
methodFunction Man page Source code
metricsCols Man page
minorVersion Man page Source code
missingOrNULL-class Man page
modifyPathString Man page
params Man page
parentDir Man page
parentDirectory Man page Source code
pasteURL Man page Source code
printString Man page Source code
rankedMatrix Man page
rankedMatrix,matrix-method Man page
realpath Man page Source code
removeFromPath Man page Source code
requireNamespaces Man page Source code
sanitizeVersion Man page Source code
sem Man page
sem,AsIs-method Man page
sem,numeric-method Man page
shell Man page Source code
showHeader Man page
showHeader,ANY-method Man page
showHeader,Annotated-method Man page
showSlotInfo Man page Source code
simpleClass Man page Source code
splitPathString Man page Source code
standardizeCall Man page Source code
tempdir2 Man page Source code
truncateString Man page Source code
uniquePathString Man page Source code
unlink2 Man page Source code
updateMessage Man page
zscore Man page
zscore,matrix-method Man page
zscore,numeric-method Man page
acidgenomics/AcidBase documentation built on Nov. 29, 2022, 7:39 a.m.