excludeProblematicCells: Exclude problematic cells

In acidgenomics/Cellosaurus: Cellosaurus

Exclude problematic cells

Description

Exclude problematic cells

Usage

excludeProblematicCells(object, ...)

## S4 method for signature 'Cellosaurus'
excludeProblematicCells(object)

Arguments

object	Object.
...	Additional arguments.

Details

excludeProblematicCells filters based on "Problematic cell line" metadata in cell line comments. This also removes contaminated cell lines, and is more strict.

Value

Modified object, with problematic cells excluded (removed).

Note

Updated 2023-09-12.

See Also

• Cellosaurus package.

Examples

data(cello)

## Cellosaurus ====
object <- cello
print(dim(object))
object <- excludeProblematicCells(object)
print(dim(object))

acidgenomics/Cellosaurus documentation built on March 15, 2024, 1:28 a.m.