Man pages for acidgenomics/DepMapAnalysis
DepMap Analysis Utilities

CCLECopyNumberDataImport CCLE copy number data
CCLECopyNumberData-classCCLE copy number data
CCLEExpressionDataImport CCLE expression data
CCLEExpressionData-classCCLE expression data
CCLEFusionDataImport CCLE fusion data
CCLEFusionData-classCCLE fusion data
CCLEMutationDataImport CCLE mutation data
CCLEMutationData-classCCLE mutation data
CodependenciesImport Co-dependency scores
Codependencies-classGene effect co-dependencies
crisprCRISPR example data set
DepMapAnalysis-packageDepMapAnalysis
GeneEffectGene effect in cancer cell lines
GeneEffect-classGene effect in cancer cell lines
paramsShared parameter documentation
plotGeneEffectPlot gene effect
plotGeneEffectVsExpressionPlot gene effect vs. expression
plotTopGeneEffectPerCellPlot top gene effect (dependencies) per cell
plotTopGeneEffectPerGroupPlot top gene effect per group of interest
rnaiRNAi example data set
showShow an object
acidgenomics/DepMapAnalysis documentation built on Jan. 26, 2024, 8:21 p.m.