mapGencodeToEnsembl: Map GENCODE release to Ensembl

In acidgenomics/r-acidgenomes: Acid Genomics Genome Annotations

Map GENCODE release to Ensembl

Description

Map GENCODE release to Ensembl

Usage

mapGencodeToEnsembl(release)

Arguments

release

integer(1) or character(1). Human (e.g. 42) or mouse (e.g. "M21") GENCODE release.

Value

integer(1). Ensembl release.

Note

Updated 2023-02-10.

See Also

• https://www.gencodegenes.org/human/releases.html

• https://www.gencodegenes.org/mouse/releases.html

• https://ftp.ebi.ac.uk/pub/databases/gencode/Gencode_human/_README.TXT

• https://ftp.ebi.ac.uk/pub/databases/gencode/Gencode_mouse/_README.TXT

Examples

## Homo sapiens.
mapGencodeToEnsembl(42L)
## Mus musculus.
mapGencodeToEnsembl("M31")

acidgenomics/r-acidgenomes documentation built on Jan. 12, 2024, 4:06 a.m.