bnd_matching: match breakends

View source: R/manta_vcf2bedpe.R

bnd_matchingR Documentation

match breakends

Description

Pairs mate ids from vcf and constructs bedpe row for the SV

Usage

bnd_matching(id, bnd)

Arguments

id

mate id to pair breakpoints

bnd

data table of breakend SVs

Details

Read mate pairing for bedpe construction, internally used

Value

SV data table with matched breakpoints


acranej/InProgress documentation built on April 25, 2022, 5:30 a.m.