pospos_pospos.label: Label a group of cells positive for one of two two-gene...
In adamnc2/simpleSCDE: Simplified Cell Data Manipulation and SCDE Testing

pospos_pospos.label(df, rowname.x1, rowname.x2, rowname.y1, rowname.y2,
  x1 = 100, x2 = 100, y1 = 100, y2 = 100, x1.limit = 0,
  x2.limit = 0, y1.limit = 0, y2.limit = 0, posname.x = "pos_x",
  posname.y = "pos_y")

`df`	A data frame
`rowname.x1`	The name of a gene(row) to be measured for hits in provided cells
`rowname.x2`	The name of a gene(row) to be measured for hits in provided cells
`rowname.y1`	The name of a gene(row) to be measured for hits in provided cells
`rowname.y2`	The name of a gene(row) to be measured for hits in provided cells
`x1`	The minimum number of hits required to label a cell positive for the expression of a particular gene(`rowname.x1`) (default: 100)
`x2`	The minimum number of hits required to label a cell positive for the expression of a particular gene(`rowname.x2`) (defualt: 100)
`y1`	The minimum number of hits required to label a cell positive for the expression of a particular gene(`rowname.y1`) (default: 100)
`y2`	The minimum number of hits required to label a cell positive for the expression of a particular gene(`rowname.y2`) (defualt: 100)
`x1.limit`	The maximum number of hits of the gene defined by `rowname.x1` that is allowed to be present in a y-positive cell (default: 0)
`x2.limit`	The maximum number of hits of the gene defined by `rowname.x2` that is allowed to be present in a y-positive cell (default: 0)
`y1.limit`	The maximum number of hits of the gene defined by `rowname.y1` that is allowed to be present in a x-positive cell (default: 0)
`y2.limit`	The maximum number of hits of the gene defined by `rowname.y2` that is allowed to be present in a x-positive cell (default: 0)
`posname.x`	The string to label cells that are determined to be positive for both (rowname.x1) and (rowname.x2) (default: "pos_x")} \item{posname.y}{The string to label cells that are determined to be positive for both (rowname.y1) and (rowname.y2) (default: "pos_y")} } { A named character vector that contains `posname.x`, `posname.y`, or 'NA' labels for each cell } { Label a group of cells positive for one of two two-gene groupings } { pospos_pospos.label(df = Fincher, x = 100, rowname.x1 = 'dd_Smed_v4_12111_0_1', rowname.x2 = 'dd_Smed_v4_23400_0_2', rowname.y1 = "dd_Smed_v4_840_0_1", rowname.y2 = "dd_Smed_v4_702_0_1", x1 = 10, x2 = 5, y1 = 12, y2 = 20, posname.x = 'slit_23400.pos', posname.y = '840_collagen.pos') }