Tengeler2020_pq: This tutorial explores the dataset from Tengeler et al....
In adrientaudiere/MiscMetabar: Miscellaneous Functions for Metabarcoding Analysis
Tengeler2020_pq R Documentation
This tutorial explores the dataset from Tengeler et al. (2020) available in the mia package.
obtained using mia::makePhyloseqFromTreeSE(Tengeler2020)
Description
This is a phyloseq version of the Tengeler2020 dataset.
Usage
data(Tengeler2020_pq)
Format
A phyloseq object
Details
Tengeler2020 includes gut microbiota profiles of 27 persons with ADHD.
A standard bioinformatic and statistical analysis done to demonstrate that altered microbial
composition could be a driver of altered brain structure and function and concomitant changes
in the animals behavior. This was investigated by colonizing young, male,
germ-free C57BL/6JOlaHsd mice with microbiota from individuals with and without ADHD.
Tengeler, A.C., Dam, S.A., Wiesmann, M. et al. Gut microbiota from persons with
attention-deficit/hyperactivity disorder affects the brain in mice. Microbiome 8, 44 (2020).
https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-020-00816-x
adrientaudiere/MiscMetabar documentation built on Oct. 13, 2024, 9:42 p.m.
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| Tengeler2020_pq | R Documentation |
This tutorial explores the dataset from Tengeler et al. (2020) available in the mia package.
obtained using mia::makePhyloseqFromTreeSE(Tengeler2020)
Description
This is a phyloseq version of the Tengeler2020 dataset.
Usage
data(Tengeler2020_pq)
Format
A phyloseq object
Details
Tengeler2020 includes gut microbiota profiles of 27 persons with ADHD. A standard bioinformatic and statistical analysis done to demonstrate that altered microbial composition could be a driver of altered brain structure and function and concomitant changes in the animals behavior. This was investigated by colonizing young, male, germ-free C57BL/6JOlaHsd mice with microbiota from individuals with and without ADHD.
Tengeler, A.C., Dam, S.A., Wiesmann, M. et al. Gut microbiota from persons with attention-deficit/hyperactivity disorder affects the brain in mice. Microbiome 8, 44 (2020). https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-020-00816-x
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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