rename_samples_otu_table: Rename samples of an otu_table
In adrientaudiere/MiscMetabar: Miscellaneous Functions for Metabarcoding Analysis
rename_samples_otu_table R Documentation
Rename samples of an otu_table
Description
Useful for targets bioinformatic pipeline.
Usage
rename_samples_otu_table(physeq, names_of_samples)
Arguments
physeq
(required): a phyloseq-class object obtained
using the phyloseq package.
names_of_samples
(required) The new names of the samples
Value
the matrix with new colnames (or rownames if taxa_are_rows is true)
Author(s)
Adrien Taudière
Examples
rename_samples_otu_table(data_fungi, as.character(seq_along(sample_names(data_fungi))))
adrientaudiere/MiscMetabar documentation built on Sept. 13, 2024, 1:45 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| rename_samples_otu_table | R Documentation |
Rename samples of an otu_table
Description
Useful for targets bioinformatic pipeline.
Usage
rename_samples_otu_table(physeq, names_of_samples)
Arguments
physeq |
(required): a |
names_of_samples |
(required) The new names of the samples |
Value
the matrix with new colnames (or rownames if taxa_are_rows is true)
Author(s)
Adrien Taudière
Examples
rename_samples_otu_table(data_fungi, as.character(seq_along(sample_names(data_fungi))))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.