design: Accessors for the 'design' slot of a DESeqDataSet object.

In aghozlane/DESeq2shaman: Differential gene expression analysis based on the negative binomial distribution

Description

Accessors for the 'design' slot of a DESeqDataSet object.

Usage

## S4 method for signature 'DESeqDataSet'
design(object)

## S4 replacement method for signature 'DESeqDataSet,formula'
design(object)<-value

## S4 method for signature 'DESeqDataSet'
design(object)

## S4 replacement method for signature 'DESeqDataSet,formula'
design(object) <- value

Arguments

object	a DESeqDataSet object
value	a formula used for estimating dispersion and fitting Negative Binomial GLMs

Examples

dds <- makeExampleDESeqDataSet()
design(dds) <- formula(~ 1)

aghozlane/DESeq2shaman documentation built on Nov. 1, 2019, 9:01 p.m.