dispersions: Accessor functions for the dispersion estimates in a...

In aghozlane/DESeq2shaman: Differential gene expression analysis based on the negative binomial distribution

Description

The dispersions for each row of the DESeqDataSet. Generally, these should be set only by estimateDispersions.

Usage

dispersions(object, ...)

dispersions(object, ...) <- value

## S4 method for signature 'DESeqDataSet'
dispersions(object)

## S4 replacement method for signature 'DESeqDataSet,numeric'
dispersions(object)<-value

## S4 method for signature 'DESeqDataSet'
dispersions(object)

Arguments

object	a DESeqDataSet object.
...	additional arguments
value	the dispersions to use for the Negative Binomial modeling

Author(s)

Simon Anders

See Also

estimateDispersions

Examples

example("estimateDispersions")
head(dispersions(dds))

aghozlane/DESeq2shaman documentation built on Nov. 1, 2019, 9:01 p.m.