R/seqfeature.R
In ahvigil/featuR: Tools for Dealing with FEATURE Data in R
SEQ_FEATURE <- c(
"2FE2S_FER_1.1.CYS.SG",
"2FE2S_FER_1.6.CYS.SG",
"2FE2S_FER_1.9.CYS.SG",
"4FE4S_FER_1.11.CYS.SG",
"4FE4S_FER_1.1.CYS.SG",
"4FE4S_FER_1.4.CYS.SG",
"4FE4S_FER_1.7.CYS.SG",
"4HBCOA_THIOESTERASE.5.ASP.OD1",
"4HBCOA_THIOESTERASE.5.ASP.OD2",
"AA_TRANSFER_CLASS_1.4.LYS.NZ",
"AA_TRANSFER_CLASS_2.4.LYS.NZ",
"ACONITASE_2.6.CYS.SG",
"ACONITASE_2.9.CYS.SG",
"A_DEAMINASE.5.ASP.OD1",
"A_DEAMINASE.5.ASP.OD2",
"A_DEAMINASE.6.ASP.OD1",
"A_DEAMINASE.6.ASP.OD2",
"ADENYLATE_KINASE.3.ASP.OD1",
"ADENYLATE_KINASE.3.ASP.OD2",
"ADENYLATE_KINASE.7.ARG.NE",
"ADENYLATE_KINASE.7.ARG.NH1",
"ADENYLATE_KINASE.7.ARG.NH2",
"ADENYLOSUCCIN_SYN_2.8.LYS.NZ",
"ADH_SHORT.5.TYR.OH",
"ADH_ZINC.2.HIS.ND1",
"ADH_ZINC.2.HIS.NE2",
"ADX.1.CYS.SG",
"ADX.6.CYS.SG",
"ADX.9.CYS.SG",
"ALBUMIN_1.3.CYS.SG",
"ALBUMIN_1.4.CYS.SG",
"ALBUMIN_1.8.CYS.SG",
"ALDEHYDE_DEHYDR_CYS.8.CYS.SG",
"ALDEHYDE_DEHYDR_GLU.2.GLU.OE1",
"ALDEHYDE_DEHYDR_GLU.2.GLU.OE2",
"ALDOKETO_REDUCTASE_3.8.ARG.NE",
"ALDOKETO_REDUCTASE_3.8.ARG.NH1",
"ALDOKETO_REDUCTASE_3.8.ARG.NH2",
"ALDOLASE_CLASS_I.9.LYS.NZ",
"ALDOLASE_KDPG_KHG_1.8.ARG.NE",
"ALDOLASE_KDPG_KHG_1.8.ARG.NH1",
"ALDOLASE_KDPG_KHG_1.8.ARG.NH2",
"ALDOLASE_KDPG_KHG_2.4.LYS.NZ",
"ALKALINE_PHOSPHATASE.4.SER.OG",
"All_SeqFEATURE_models",
"ALPHA_2_MACROGLOBULIN.4.CYS.SG",
"ALPHA_2_MACROGLOBULIN.7.GLN.NE2",
"ALPHA_2_MACROGLOBULIN.7.GLN.OE1",
"ALPHA_2_MACROGLOBULIN.7.GLU.OE1",
"ALPHA_2_MACROGLOBULIN.7.GLU.OE2",
"ALPHA_CA_1.11.HIS.ND1",
"ALPHA_CA_1.11.HIS.NE2",
"AP_NUCLEASE_F1_1.7.GLU.OE1",
"AP_NUCLEASE_F1_1.7.GLU.OE2",
"AP_NUCLEASE_F2_1.1.HIS.ND1",
"AP_NUCLEASE_F2_1.1.HIS.NE2",
"AP_NUCLEASE_F2_2.5.ASP.OD1",
"AP_NUCLEASE_F2_2.5.ASP.OD2",
"AP_NUCLEASE_F2_2.8.HIS.ND1",
"AP_NUCLEASE_F2_2.8.HIS.NE2",
"AP_NUCLEASE_F2_3.10.ASP.OD1",
"AP_NUCLEASE_F2_3.10.ASP.OD2",
"AP_NUCLEASE_F2_3.12.HIS.ND1",
"AP_NUCLEASE_F2_3.12.HIS.NE2",
"AP_NUCLEASE_F2_3.2.HIS.ND1",
"AP_NUCLEASE_F2_3.2.HIS.NE2",
"ARGC.6.CYS.SG",
"ARGINASE_1.3.ASP.OD1",
"ARGINASE_1.3.ASP.OD2",
"ARGINASE_1.5.ASP.OD1",
"ARGINASE_1.5.ASP.OD2",
"ASN_GLN_ASE_1.7.THR.OG1",
"ASN_GLN_ASE_2.7.THR.OG1",
"ASP_GLU_RACEMASE_2.4.CYS.SG",
"ASP_PROTEASE.4.ASP.OD1",
"ASP_PROTEASE.4.ASP.OD2",
"ASX_HYDROXYL.3.ASN.ND2",
"ASX_HYDROXYL.3.ASN.OD1",
"ASX_HYDROXYL.3.ASP.OD1",
"ASX_HYDROXYL.3.ASP.OD2",
"ATPASE_ALPHA_BETA.8.SER.OG",
"ATPASE_C.14.ASP.OD1",
"ATPASE_C.14.ASP.OD2",
"ATPASE_C.14.GLU.OE1",
"ATPASE_C.14.GLU.OE2",
"ATPASE_E1_E2.1.ASP.OD1",
"ATPASE_E1_E2.1.ASP.OD2",
"BACTERIAL_OPSIN_RET.9.LYS.NZ",
"BETA_AMYLASE_1.9.ASP.OD1",
"BETA_AMYLASE_1.9.ASP.OD2",
"BETA_AMYLASE_2.5.GLU.OE1",
"BETA_AMYLASE_2.5.GLU.OE2",
"BETA_ELIM_LYASE.9.LYS.NZ",
"BETA_LACTAMASE_A.5.SER.OG",
"BETA_LACTAMASE_B_2.7.CYS.SG",
"BETA_LACTAMASE_C.5.SER.OG",
"BETA_LACTAMASE_D.3.SER.OG",
"BH4_AAA_HYDROXYL_1.4.HIS.ND1",
"BH4_AAA_HYDROXYL_1.4.HIS.NE2",
"BH4_AAA_HYDROXYL_1.9.HIS.ND1",
"BH4_AAA_HYDROXYL_1.9.HIS.NE2",
"BIOTIN.10.LYS.NZ",
"B_KETOACYL_SYNTHASE.9.CYS.SG",
"BPTI_KUNITZ_1.5.CYS.SG",
"BPTI_KUNITZ_1.9.CYS.SG",
"C5_MTASE_1.8.CYS.SG",
"CADHERIN_1.5.ASP.OD1",
"CADHERIN_1.5.ASP.OD2",
"CADHERIN_1.7.ASN.ND2",
"CADHERIN_1.7.ASN.OD1",
"CADHERIN_1.8.ASP.OD1",
"CADHERIN_1.8.ASP.OD2",
"CARBOXYLESTERASE_B_1.11.SER.OG",
"CARBOXYLESTERASE_B_2.3.CYS.SG",
"CARBOXYPEPT_SER_HIS.10.HIS.ND1",
"CARBOXYPEPT_SER_HIS.10.HIS.NE2",
"CARBOXYPEPT_SER_SER.5.SER.OG",
"CARBOXYPEPT_ZN_1.12.GLU.OE1",
"CARBOXYPEPT_ZN_1.12.GLU.OE2",
"CARBOXYPEPT_ZN_1.9.HIS.ND1",
"CARBOXYPEPT_ZN_1.9.HIS.NE2",
"CARBOXYPEPT_ZN_2.1.HIS.ND1",
"CARBOXYPEPT_ZN_2.1.HIS.NE2",
"CASPASE_CYS.7.GLN.NE2",
"CASPASE_CYS.7.GLN.OE1",
"CAT.4.HIS.ND1",
"CAT.4.HIS.NE2",
"CATALASE_1.5.TYR.OH",
"CATALASE_2.8.HIS.ND1",
"CATALASE_2.8.HIS.NE2",
"CHALCONE_SYNTH.9.CYS.SG",
"CHITINASE_18.9.GLU.OE1",
"CHITINASE_18.9.GLU.OE2",
"CLP_PROTEASE_HIS.8.HIS.ND1",
"CLP_PROTEASE_HIS.8.HIS.NE2",
"CLP_PROTEASE_SER.8.SER.OG",
"COLIPASE_1.1.TYR.OH",
"COLIPASE_1.3.TYR.OH",
"COLIPASE_1.4.TYR.OH",
"COLIPASE_1.6.CYS.SG",
"COLIPASE_1.8.CYS.SG",
"COMPLEX1_24K.10.CYS.SG",
"COMPLEX1_24K.6.CYS.SG",
"COMPLEX1_51K_2.3.CYS.SG",
"COMPLEX1_51K_2.6.CYS.SG",
"COMPLEX1_51K_2.9.CYS.SG",
"COMPLEX1_75K_1.11.CYS.SG",
"COMPLEX1_75K_1.3.CYS.SG",
"COMPLEX1_75K_1.8.CYS.SG",
"COMPLEX1_75K_2.9.CYS.SG",
"CONNEXINS_1.11.CYS.SG",
"CONNEXINS_1.1.CYS.SG",
"CONNEXINS_1.8.CYS.SG",
"COPPER_AMINE_OXID_1.8.TYR.OH",
"COPPER_AMINE_OXID_2.5.HIS.ND1",
"COPPER_AMINE_OXID_2.5.HIS.NE2",
"COX5B_1.4.CYS.SG",
"COX5B_1.6.CYS.SG",
"CRISP_2.4.CYS.SG",
"CU2_MONOOXYGENASE_1.1.HIS.ND1",
"CU2_MONOOXYGENASE_1.1.HIS.NE2",
"CU2_MONOOXYGENASE_1.2.HIS.ND1",
"CU2_MONOOXYGENASE_1.2.HIS.NE2",
"CU2_MONOOXYGENASE_2.1.HIS.ND1",
"CU2_MONOOXYGENASE_2.1.HIS.NE2",
"CU2_MONOOXYGENASE_2.5.HIS.ND1",
"CU2_MONOOXYGENASE_2.5.HIS.NE2",
"CU2_MONOOXYGENASE_2.7.HIS.ND1",
"CU2_MONOOXYGENASE_2.7.HIS.NE2",
"CUTINASE_1.11.SER.OG",
"CYCLOTIDE_MOEBIUS.10.CYS.SG",
"CYCLOTIDE_MOEBIUS.1.CYS.SG",
"CYCLOTIDE_MOEBIUS.5.CYS.SG",
"CYS_MET_METAB_PP.6.THR.OG1",
"CYSTEINE_SWITCH.3.CYS.SG",
"CYTOCHROME_B5_1.5.HIS.ND1",
"CYTOCHROME_B5_1.5.HIS.NE2",
"CYTOCHROME_B559.9.HIS.ND1",
"CYTOCHROME_B559.9.HIS.NE2",
"CYTOCHROME_P450.8.CYS.SG",
"CYTOSOL_AP.3.ASP.OD1",
"CYTOSOL_AP.3.ASP.OD2",
"CYTOSOL_AP.5.GLU.OE1",
"CYTOSOL_AP.5.GLU.OE2",
"D_ALA_DEHYDRATASE.7.LYS.NZ",
"DAO.2.HIS.ND1",
"DAO.2.HIS.NE2",
"DAP_EPIMERASE.7.CYS.SG",
"DDC_GAD_HDC_YDC.6.LYS.NZ",
"DIHYDROOROTASE_1.3.HIS.ND1",
"DIHYDROOROTASE_1.3.HIS.NE2",
"DIHYDROOROTASE_1.5.HIS.ND1",
"DIHYDROOROTASE_1.5.HIS.NE2",
"DNA_LIGASE_N1.1.LYS.NZ",
"DNA_POLYMERASE_X.10.ASP.OD1",
"DNA_POLYMERASE_X.10.ASP.OD2",
"DNA_POLYMERASE_X.12.ASP.OD1",
"DNA_POLYMERASE_X.12.ASP.OD2",
"DNA_POLYMERASE_X.5.ARG.NE",
"DNA_POLYMERASE_X.5.ARG.NH1",
"DNA_POLYMERASE_X.5.ARG.NH2",
"DNASE_I_1.4.HIS.ND1",
"DNASE_I_1.4.HIS.NE2",
"DNASE_I_2.7.CYS.SG",
"EF_HAND_1.11.ASP.OD1",
"EF_HAND_1.11.ASP.OD2",
"EF_HAND_1.11.GLU.OE1",
"EF_HAND_1.11.GLU.OE2",
"EF_HAND_1.1.ASP.OD1",
"EF_HAND_1.1.ASP.OD2",
"EF_HAND_1.3.ASN.ND2",
"EF_HAND_1.3.ASN.OD1",
"EF_HAND_1.3.ASP.OD1",
"EF_HAND_1.3.ASP.OD2",
"EF_HAND_1.3.SER.OG",
"EF_HAND_1.5.ASN.ND2",
"EF_HAND_1.5.ASN.OD1",
"EF_HAND_1.5.ASP.OD1",
"EF_HAND_1.5.ASP.OD2",
"EF_HAND_1.5.GLU.OE1",
"EF_HAND_1.5.GLU.OE2",
"EF_HAND_1.5.SER.OG",
"EF_HAND_1.5.THR.OG1",
"EF_HAND_1.7.ARG.NE",
"EF_HAND_1.7.ARG.NH1",
"EF_HAND_1.7.ARG.NH2",
"EF_HAND_1.7.ASN.ND2",
"EF_HAND_1.7.ASN.OD1",
"EF_HAND_1.7.ASP.OD1",
"EF_HAND_1.7.ASP.OD2",
"EF_HAND_1.7.CYS.SG",
"EF_HAND_1.7.GLN.NE2",
"EF_HAND_1.7.GLN.OE1",
"EF_HAND_1.7.GLU.OE1",
"EF_HAND_1.7.GLU.OE2",
"EF_HAND_1.7.HIS.ND1",
"EF_HAND_1.7.HIS.NE2",
"EF_HAND_1.7.LYS.NZ",
"EF_HAND_1.7.SER.OG",
"EF_HAND_1.7.THR.OG1",
"EF_HAND_1.7.TYR.OH",
"EF_HAND_1.9.ASN.ND2",
"EF_HAND_1.9.ASN.OD1",
"EF_HAND_1.9.ASP.OD1",
"EF_HAND_1.9.ASP.OD2",
"EF_HAND_1.9.CYS.SG",
"EF_HAND_1.9.GLN.NE2",
"EF_HAND_1.9.GLN.OE1",
"EF_HAND_1.9.GLU.OE1",
"EF_HAND_1.9.GLU.OE2",
"EF_HAND_1.9.SER.OG",
"EF_HAND_1.9.THR.OG1",
"EGF_1.10.CYS.SG",
"EGF_1.1.CYS.SG",
"EGF_1.3.CYS.SG",
"ENDONUCLEASE_III_1.10.CYS.SG",
"ENDONUCLEASE_III_1.1.CYS.SG",
"ENDONUCLEASE_III_1.6.CYS.SG",
"ENDONUCLEASE_III_1.8.CYS.SG",
"FERRITIN_1.1.GLU.OE1",
"FERRITIN_1.1.GLU.OE2",
"FERRITIN_1.4.GLU.OE1",
"FERRITIN_1.4.GLU.OE2",
"FERRITIN_1.6.GLU.OE1",
"FERRITIN_1.6.GLU.OE2",
"FERRITIN_2.5.ASP.OD1",
"FERRITIN_2.5.ASP.OD2",
"FERRITIN_2.8.GLU.OE1",
"FERRITIN_2.8.GLU.OE2",
"FIBRINOGEN_C_1.5.CYS.SG",
"FMN_HYDROXY_ACID_DH_1.3.HIS.ND1",
"FMN_HYDROXY_ACID_DH_1.3.HIS.NE2",
"FMN_HYDROXY_ACID_DH_1.6.ARG.NE",
"FMN_HYDROXY_ACID_DH_1.6.ARG.NH1",
"FMN_HYDROXY_ACID_DH_1.6.ARG.NH2",
"FRD_SDH_FAD_BINDING.3.HIS.ND1",
"FRD_SDH_FAD_BINDING.3.HIS.NE2",
"G6P_DEHYDROGENASE.6.LYS.NZ",
"GAPDH.3.CYS.SG",
"GART.12.ASP.OD1",
"GART.12.ASP.OD2",
"GLFV_DEHYDROGENASE.6.LYS.NZ",
"GLNA_ADENYLATION.9.TYR.OH",
"GLUTATHIONE_PEROXID_1.12.CYS.SG",
"GLYCO_HORMONE_ALPHA_1.1.CYS.SG",
"GLYCO_HORMONE_ALPHA_1.4.CYS.SG",
"GLYCO_HORMONE_ALPHA_1.5.CYS.SG",
"GLYCO_HORMONE_ALPHA_2.10.CYS.SG",
"GLYCO_HORMONE_ALPHA_2.5.CYS.SG",
"GLYCO_HORMONE_ALPHA_2.7.CYS.SG",
"GLYCO_HORMONE_BETA_1.1.CYS.SG",
"GLYCO_HORMONE_BETA_1.5.CYS.SG",
"GLYCOPROTEASE.11.HIS.ND1",
"GLYCOPROTEASE.11.HIS.NE2",
"GLYCOPROTEASE.14.HIS.ND1",
"GLYCOPROTEASE.14.HIS.NE2",
"GLYCOSYL_HYDROL_F10.8.GLU.OE1",
"GLYCOSYL_HYDROL_F10.8.GLU.OE2",
"GLYCOSYL_HYDROL_F11_1.4.GLU.OE1",
"GLYCOSYL_HYDROL_F11_1.4.GLU.OE2",
"GLYCOSYL_HYDROL_F11_2.3.GLU.OE1",
"GLYCOSYL_HYDROL_F11_2.3.GLU.OE2",
"GLYCOSYL_HYDROL_F1_1.5.GLU.OE1",
"GLYCOSYL_HYDROL_F1_1.5.GLU.OE2",
"GLYCOSYL_HYDROL_F31_1.5.ASP.OD1",
"GLYCOSYL_HYDROL_F31_1.5.ASP.OD2",
"GLYCOSYL_HYDROL_F3.11.ASP.OD1",
"GLYCOSYL_HYDROL_F3.11.ASP.OD2",
"GLYCOSYL_HYDROL_F32.7.ASP.OD1",
"GLYCOSYL_HYDROL_F32.7.ASP.OD2",
"GLYCOSYL_HYDROL_F39.8.GLU.OE1",
"GLYCOSYL_HYDROL_F39.8.GLU.OE2",
"GLYCOSYL_HYDROL_F5.7.GLU.OE1",
"GLYCOSYL_HYDROL_F5.7.GLU.OE2",
"GLYCOSYL_HYDROL_F6_1.8.ASP.OD1",
"GLYCOSYL_HYDROL_F6_1.8.ASP.OD2",
"GLYCOSYL_HYDROL_F6_1.9.CYS.SG",
"GLYCOSYL_HYDROL_F6_2.7.ASP.OD1",
"GLYCOSYL_HYDROL_F6_2.7.ASP.OD2",
"GLYCOSYL_HYDROL_F8.3.ASP.OD1",
"GLYCOSYL_HYDROL_F8.3.ASP.OD2",
"GLYCOSYL_HYDROL_F9_1.11.HIS.ND1",
"GLYCOSYL_HYDROL_F9_1.11.HIS.NE2",
"GLYCOSYL_HYDROL_F9_2.3.ASP.OD1",
"GLYCOSYL_HYDROL_F9_2.3.ASP.OD2",
"GLYCOSYL_HYDROL_F9_2.7.GLU.OE1",
"GLYCOSYL_HYDROL_F9_2.7.GLU.OE2",
"HEME_OXYGENASE.4.HIS.ND1",
"HEME_OXYGENASE.4.HIS.NE2",
"HEMOCYANIN_1.10.HIS.ND1",
"HEMOCYANIN_1.10.HIS.NE2",
"HIS_ACID_PHOSPHAT_1.8.HIS.ND1",
"HIS_ACID_PHOSPHAT_1.8.HIS.NE2",
"HIS_ACID_PHOSPHAT_2.7.HIS.ND1",
"HIS_ACID_PHOSPHAT_2.7.HIS.NE2",
"HMG_COA_REDUCTASE_3.10.HIS.ND1",
"HMG_COA_REDUCTASE_3.10.HIS.NE2",
"IF5A_HYPUSINE.3.LYS.NZ",
"IG_MHC.3.CYS.SG",
"IMP_DH_GMP_RED.11.CYS.SG",
"INSULIN.11.CYS.SG",
"INSULIN.1.CYS.SG",
"INSULIN.2.CYS.SG",
"INSULIN.6.CYS.SG",
"INTERFERON_A_B_D.10.CYS.SG",
"INTERLEUKIN_10.3.CYS.SG",
"INTERLEUKIN_2.7.CYS.SG",
"INTERLEUKIN_6.1.CYS.SG",
"INTERLEUKIN_6.3.CYS.SG",
"INTRADIOL_DIOXYGENAS.17.TYR.OH",
"IPNS_1.7.CYS.SG",
"IPNS_2.3.CYS.SG",
"ISOCITRATE_LYASE.3.CYS.SG",
"LACTALBUMIN_LYSOZYME_1.10.CYS.SG",
"LACTALBUMIN_LYSOZYME_1.1.CYS.SG",
"LACTALBUMIN_LYSOZYME_1.3.CYS.SG",
"LECTIN_LEGUME_BETA.4.GLU.OE1",
"LECTIN_LEGUME_BETA.4.GLU.OE2",
"LECTIN_LEGUME_BETA.6.ASP.OD1",
"LECTIN_LEGUME_BETA.6.ASP.OD2",
"LIF_OSM.8.CYS.SG",
"LIPASE_SER.7.SER.OG",
"LIPOXYGENASE_1.4.HIS.ND1",
"LIPOXYGENASE_1.4.HIS.NE2",
"LIPOXYGENASE_1.9.HIS.ND1",
"LIPOXYGENASE_1.9.HIS.NE2",
"LIPOYL.13.LYS.NZ",
"L_LDH.4.HIS.ND1",
"L_LDH.4.HIS.NE2",
"MAP_2.15.ASP.OD1",
"MAP_2.15.ASP.OD2",
"MAP_2.6.ASP.OD1",
"MAP_2.6.ASP.OD2",
"MDH.5.ASP.OD1",
"MDH.5.ASP.OD2",
"MDH.7.ARG.NE",
"MDH.7.ARG.NH1",
"MDH.7.ARG.NH2",
"MR_MLE_2.12.GLU.OE1",
"MR_MLE_2.12.GLU.OE2",
"MR_MLE_2.3.ASP.OD1",
"MR_MLE_2.3.ASP.OD2",
"MULTICOPPER_OXIDASE2.1.HIS.ND1",
"MULTICOPPER_OXIDASE2.1.HIS.NE2",
"MULTICOPPER_OXIDASE2.2.CYS.SG",
"MULTICOPPER_OXIDASE2.3.HIS.ND1",
"MULTICOPPER_OXIDASE2.3.HIS.NE2",
"MULTICOPPER_OXIDASE2.5.HIS.ND1",
"MULTICOPPER_OXIDASE2.5.HIS.NE2",
"NATRIURETIC_PEPTIDE.12.CYS.SG",
"NATRIURETIC_PEPTIDE.1.CYS.SG",
"NDP_KINASES.3.HIS.ND1",
"NDP_KINASES.3.HIS.NE2",
"NEUROTR_ION_CHANNEL.12.CYS.SG",
"NEUROTR_ION_CHANNEL.1.CYS.SG",
"NGF_1.12.CYS.SG",
"NGF_1.2.CYS.SG",
"NIFH_FRXC_1.10.CYS.SG",
"NIFH_FRXC_2.8.CYS.SG",
"NI_HGENASE_L_1.12.CYS.SG",
"NI_HGENASE_L_1.9.CYS.SG",
"NIR_SIR.3.CYS.SG",
"NIR_SIR.5.CYS.SG",
"NITROGENASE_1_1.8.CYS.SG",
"NITROGENASE_1_2.3.CYS.SG",
"NUCLEASE_NON_SPEC.4.HIS.ND1",
"NUCLEASE_NON_SPEC.4.HIS.NE2",
"ODR_DC_2_1.4.LYS.NZ",
"OMPDECASE.6.LYS.NZ",
"OPSIN.7.LYS.NZ",
"PA2_ASP.11.CYS.SG",
"PA2_ASP.2.CYS.SG",
"PA2_ASP.4.CYS.SG",
"PA2_ASP.5.ASP.OD1",
"PA2_ASP.5.ASP.OD2",
"PA2_HIS.1.CYS.SG",
"PA2_HIS.2.CYS.SG",
"PA2_HIS.5.HIS.ND1",
"PA2_HIS.5.HIS.NE2",
"PA2_HIS.8.CYS.SG",
"PDGF_1.10.CYS.SG",
"PDGF_1.11.CYS.SG",
"PDGF_1.3.CYS.SG",
"PDGF_1.7.CYS.SG",
"PECTINESTERASE_2.6.ASP.OD1",
"PECTINESTERASE_2.6.ASP.OD2",
"PENTAXIN.3.CYS.SG",
"PEPCK_GTP.5.CYS.SG",
"PEP_ENZYMES_PHOS_SITE.6.HIS.ND1",
"PEP_ENZYMES_PHOS_SITE.6.HIS.NE2",
"PEROXIDASE_1.9.HIS.ND1",
"PEROXIDASE_1.9.HIS.NE2",
"PEROXIDASE_2.9.HIS.ND1",
"PEROXIDASE_2.9.HIS.NE2",
"P_GLUCOSE_ISOMERASE_2.14.LYS.NZ",
"PGM_PMM.7.SER.OG",
"PG_MUTASE.4.HIS.ND1",
"PG_MUTASE.4.HIS.NE2",
"PHOSPHOFRUCTOKINASE.1.ARG.NE",
"PHOSPHOFRUCTOKINASE.1.ARG.NH1",
"PHOSPHOFRUCTOKINASE.1.ARG.NH2",
"PHOSPHOFRUCTOKINASE.1.LYS.NZ",
"PHOSPHOFRUCTOKINASE.4.HIS.ND1",
"PHOSPHOFRUCTOKINASE.4.HIS.NE2",
"PHOSPHOFRUCTOKINASE.7.ARG.NE",
"PHOSPHOFRUCTOKINASE.7.ARG.NH1",
"PHOSPHOFRUCTOKINASE.7.ARG.NH2",
"PHOSPHOFRUCTOKINASE.7.GLN.NE2",
"PHOSPHOFRUCTOKINASE.7.GLN.OE1",
"PHOSPHOPANTETHEINE.6.SER.OG",
"PHOSPHORYLASE.9.LYS.NZ",
"PHOSPHOTRIESTERASE_1.6.HIS.ND1",
"PHOSPHOTRIESTERASE_1.6.HIS.NE2",
"PHOSPHOTRIESTERASE_1.8.HIS.ND1",
"PHOSPHOTRIESTERASE_1.8.HIS.NE2",
"PHOTOSYSTEM_I_PSAAB.10.CYS.SG",
"PHOTOSYSTEM_I_PSAAB.1.CYS.SG",
"PII_GLNB_UMP.6.TYR.OH",
"PLANT_GLOBIN.6.HIS.ND1",
"PLANT_GLOBIN.6.HIS.NE2",
"PP2C.6.ASP.OD1",
"PP2C.6.ASP.OD2",
"PPASE.1.ASP.OD1",
"PPASE.1.ASP.OD2",
"PPASE.3.ASP.OD1",
"PPASE.3.ASP.OD2",
"PPASE.6.ASP.OD1",
"PPASE.6.ASP.OD2",
"PRION_2.13.CYS.SG",
"PRO_ENDOPEP_SER.9.SER.OG",
"PROKAR_ZN_DEPEND_PLPC_1.11.HIS.ND1",
"PROKAR_ZN_DEPEND_PLPC_1.11.HIS.NE2",
"PROKAR_ZN_DEPEND_PLPC_1.1.HIS.ND1",
"PROKAR_ZN_DEPEND_PLPC_1.1.HIS.NE2",
"PROKAR_ZN_DEPEND_PLPC_1.5.ASP.OD1",
"PROKAR_ZN_DEPEND_PLPC_1.5.ASP.OD2",
"PROTEIN_KINASE_ST.5.ASP.OD1",
"PROTEIN_KINASE_ST.5.ASP.OD2",
"PROTEIN_KINASE_TYR.5.ASP.OD1",
"PROTEIN_KINASE_TYR.5.ASP.OD2",
"PRPP_SYNTHASE.15.ASP.OD1",
"PRPP_SYNTHASE.15.ASP.OD2",
"PRPP_SYNTHASE.1.ASP.OD1",
"PRPP_SYNTHASE.1.ASP.OD2",
"PRPP_SYNTHASE.3.HIS.ND1",
"PRPP_SYNTHASE.3.HIS.NE2",
"PTS_EIIA_TYPE_2_HIS.10.HIS.ND1",
"PTS_EIIA_TYPE_2_HIS.10.HIS.NE2",
"PTS_HPR_HIS.3.HIS.ND1",
"PTS_HPR_HIS.3.HIS.NE2",
"PTS_HPR_SER.8.SER.OG",
"PYRASE_CYS.14.CYS.SG",
"PYRASE_GLU.8.GLU.OE1",
"PYRASE_GLU.8.GLU.OE2",
"PYRIDINE_REDOX_1.4.CYS.SG",
"PYRIDINE_REDOX_1.8.CYS.SG",
"PYRUVATE_KINASE.5.LYS.NZ",
"PYRUVATE_KINASE.7.GLU.OE1",
"PYRUVATE_KINASE.7.GLU.OE2",
"REACTION_CENTER.11.HIS.ND1",
"REACTION_CENTER.11.HIS.NE2",
"REACTION_CENTER.5.HIS.ND1",
"REACTION_CENTER.5.HIS.NE2",
"RECEPTOR_TYR_KIN_II.5.TYR.OH",
"RECEPTOR_TYR_KIN_V_1.17.CYS.SG",
"RECEPTOR_TYR_KIN_V_1.7.CYS.SG",
"RECOMBINASES_1.5.SER.OG",
"RNA_POL_N_8KD.6.CYS.SG",
"RNA_POL_N_8KD.9.CYS.SG",
"RNASE_PANCREATIC.1.CYS.SG",
"RNASE_PANCREATIC.2.LYS.NZ",
"RNASE_T2_1.4.HIS.ND1",
"RNASE_T2_1.4.HIS.NE2",
"RNASE_T2_2.11.CYS.SG",
"RNASE_T2_2.8.HIS.ND1",
"RNASE_T2_2.8.HIS.NE2",
"RUBISCO_LARGE.6.LYS.NZ",
"RUBISCO_LARGE.8.ASP.OD1",
"RUBISCO_LARGE.8.ASP.OD2",
"RUBREDOXIN.10.CYS.SG",
"RUBREDOXIN.7.CYS.SG",
"SDH_CYT_1.11.HIS.ND1",
"SDH_CYT_1.11.HIS.NE2",
"SDH_CYT_2.1.HIS.ND1",
"SDH_CYT_2.1.HIS.NE2",
"SHIGA_RICIN.5.GLU.OE1",
"SHIGA_RICIN.5.GLU.OE2",
"SHIGA_RICIN.8.ARG.NE",
"SHIGA_RICIN.8.ARG.NH1",
"SHIGA_RICIN.8.ARG.NH2",
"SHMT.8.HIS.ND1",
"SHMT.8.HIS.NE2",
"SOD_CU_ZN_1.3.HIS.ND1",
"SOD_CU_ZN_1.3.HIS.NE2",
"SOD_CU_ZN_1.5.HIS.ND1",
"SOD_CU_ZN_1.5.HIS.NE2",
"SOD_CU_ZN_2.9.CYS.SG",
"SOD_MN.1.ASP.OD1",
"SOD_MN.1.ASP.OD2",
"SOD_MN.5.HIS.ND1",
"SOD_MN.5.HIS.NE2",
"SOMATOTROPIN_1.1.CYS.SG",
"SOMATOTROPIN_2.16.CYS.SG",
"SOMATOTROPIN_2.1.CYS.SG",
"SPASE_I_1.3.SER.OG",
"SQUASH_INHIBITOR.11.CYS.SG",
"SQUASH_INHIBITOR.13.CYS.SG",
"SQUASH_INHIBITOR.1.CYS.SG",
"SQUASH_INHIBITOR.4.CYS.SG",
"SQUASH_INHIBITOR.9.CYS.SG",
"SUBTILASE_HIS.1.HIS.ND1",
"SUBTILASE_HIS.1.HIS.NE2",
"SUBTILASE_SER.3.SER.OG",
"TGF_BETA_1.11.CYS.SG",
"TGF_BETA_1.7.CYS.SG",
"THIOLASE_1.5.CYS.SG",
"THIOLASE_3.6.CYS.SG",
"THIOL_PROTEASE_ASN.6.ASN.ND2",
"THIOL_PROTEASE_ASN.6.ASN.OD1",
"THIOL_PROTEASE_CYS.7.CYS.SG",
"THIOL_PROTEASE_HIS.3.HIS.ND1",
"THIOL_PROTEASE_HIS.3.HIS.NE2",
"THIONIN.1.CYS.SG",
"THIONIN.2.CYS.SG",
"THIONIN.8.CYS.SG",
"THIOREDOXIN_1.11.CYS.SG",
"THIOREDOXIN_1.8.CYS.SG",
"TIM_1.3.GLU.OE1",
"TIM_1.3.GLU.OE2",
"TIMP.12.CYS.SG",
"TIMP.1.CYS.SG",
"TIMP.3.CYS.SG",
"TISSUE_FACTOR.12.CYS.SG",
"TISSUE_FACTOR.5.CYS.SG",
"TNASE_2.5.ARG.NE",
"TNASE_2.5.ARG.NH1",
"TNASE_2.5.ARG.NH2",
"TRANSGLUTAMINASES.3.CYS.SG",
"TRANSTHYRETIN_1.1.HIS.ND1",
"TRANSTHYRETIN_1.1.HIS.NE2",
"TRANSTHYRETIN_1.1.LYS.NZ",
"TRP_SYNTHASE_ALPHA.2.GLU.OE1",
"TRP_SYNTHASE_ALPHA.2.GLU.OE2",
"TRP_SYNTHASE_BETA.8.LYS.NZ",
"TRYPSIN_HIS.5.HIS.ND1",
"TRYPSIN_HIS.5.HIS.NE2",
"TRYPSIN_SER.6.SER.OG",
"TYROSINASE_2.7.HIS.ND1",
"TYROSINASE_2.7.HIS.NE2",
"TYR_PHOSPHATASE_1.3.CYS.SG",
"UBIQUITIN_ACTIVAT_2.3.CYS.SG",
"UCH_1.5.CYS.SG",
"U_DNA_GLYCOSYLASE.8.ASP.OD1",
"U_DNA_GLYCOSYLASE.8.ASP.OD2",
"UREASE_1.10.HIS.ND1",
"UREASE_1.10.HIS.NE2",
"UREASE_1.8.HIS.ND1",
"UREASE_1.8.HIS.NE2",
"V8_HIS.11.HIS.ND1",
"V8_HIS.11.HIS.NE2",
"V8_SER.5.SER.OG",
"ZINC_PROTEASE.4.HIS.ND1",
"ZINC_PROTEASE.4.HIS.NE2",
"ZINC_PROTEASE.5.GLU.OE1",
"ZINC_PROTEASE.5.GLU.OE2",
"ZINC_PROTEASE.8.HIS.ND1",
"ZINC_PROTEASE.8.HIS.NE2"
)
ahvigil/featuR documentation built on May 12, 2019, 2:32 a.m.
R Package Documentation
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SEQ_FEATURE <- c(
"2FE2S_FER_1.1.CYS.SG",
"2FE2S_FER_1.6.CYS.SG",
"2FE2S_FER_1.9.CYS.SG",
"4FE4S_FER_1.11.CYS.SG",
"4FE4S_FER_1.1.CYS.SG",
"4FE4S_FER_1.4.CYS.SG",
"4FE4S_FER_1.7.CYS.SG",
"4HBCOA_THIOESTERASE.5.ASP.OD1",
"4HBCOA_THIOESTERASE.5.ASP.OD2",
"AA_TRANSFER_CLASS_1.4.LYS.NZ",
"AA_TRANSFER_CLASS_2.4.LYS.NZ",
"ACONITASE_2.6.CYS.SG",
"ACONITASE_2.9.CYS.SG",
"A_DEAMINASE.5.ASP.OD1",
"A_DEAMINASE.5.ASP.OD2",
"A_DEAMINASE.6.ASP.OD1",
"A_DEAMINASE.6.ASP.OD2",
"ADENYLATE_KINASE.3.ASP.OD1",
"ADENYLATE_KINASE.3.ASP.OD2",
"ADENYLATE_KINASE.7.ARG.NE",
"ADENYLATE_KINASE.7.ARG.NH1",
"ADENYLATE_KINASE.7.ARG.NH2",
"ADENYLOSUCCIN_SYN_2.8.LYS.NZ",
"ADH_SHORT.5.TYR.OH",
"ADH_ZINC.2.HIS.ND1",
"ADH_ZINC.2.HIS.NE2",
"ADX.1.CYS.SG",
"ADX.6.CYS.SG",
"ADX.9.CYS.SG",
"ALBUMIN_1.3.CYS.SG",
"ALBUMIN_1.4.CYS.SG",
"ALBUMIN_1.8.CYS.SG",
"ALDEHYDE_DEHYDR_CYS.8.CYS.SG",
"ALDEHYDE_DEHYDR_GLU.2.GLU.OE1",
"ALDEHYDE_DEHYDR_GLU.2.GLU.OE2",
"ALDOKETO_REDUCTASE_3.8.ARG.NE",
"ALDOKETO_REDUCTASE_3.8.ARG.NH1",
"ALDOKETO_REDUCTASE_3.8.ARG.NH2",
"ALDOLASE_CLASS_I.9.LYS.NZ",
"ALDOLASE_KDPG_KHG_1.8.ARG.NE",
"ALDOLASE_KDPG_KHG_1.8.ARG.NH1",
"ALDOLASE_KDPG_KHG_1.8.ARG.NH2",
"ALDOLASE_KDPG_KHG_2.4.LYS.NZ",
"ALKALINE_PHOSPHATASE.4.SER.OG",
"All_SeqFEATURE_models",
"ALPHA_2_MACROGLOBULIN.4.CYS.SG",
"ALPHA_2_MACROGLOBULIN.7.GLN.NE2",
"ALPHA_2_MACROGLOBULIN.7.GLN.OE1",
"ALPHA_2_MACROGLOBULIN.7.GLU.OE1",
"ALPHA_2_MACROGLOBULIN.7.GLU.OE2",
"ALPHA_CA_1.11.HIS.ND1",
"ALPHA_CA_1.11.HIS.NE2",
"AP_NUCLEASE_F1_1.7.GLU.OE1",
"AP_NUCLEASE_F1_1.7.GLU.OE2",
"AP_NUCLEASE_F2_1.1.HIS.ND1",
"AP_NUCLEASE_F2_1.1.HIS.NE2",
"AP_NUCLEASE_F2_2.5.ASP.OD1",
"AP_NUCLEASE_F2_2.5.ASP.OD2",
"AP_NUCLEASE_F2_2.8.HIS.ND1",
"AP_NUCLEASE_F2_2.8.HIS.NE2",
"AP_NUCLEASE_F2_3.10.ASP.OD1",
"AP_NUCLEASE_F2_3.10.ASP.OD2",
"AP_NUCLEASE_F2_3.12.HIS.ND1",
"AP_NUCLEASE_F2_3.12.HIS.NE2",
"AP_NUCLEASE_F2_3.2.HIS.ND1",
"AP_NUCLEASE_F2_3.2.HIS.NE2",
"ARGC.6.CYS.SG",
"ARGINASE_1.3.ASP.OD1",
"ARGINASE_1.3.ASP.OD2",
"ARGINASE_1.5.ASP.OD1",
"ARGINASE_1.5.ASP.OD2",
"ASN_GLN_ASE_1.7.THR.OG1",
"ASN_GLN_ASE_2.7.THR.OG1",
"ASP_GLU_RACEMASE_2.4.CYS.SG",
"ASP_PROTEASE.4.ASP.OD1",
"ASP_PROTEASE.4.ASP.OD2",
"ASX_HYDROXYL.3.ASN.ND2",
"ASX_HYDROXYL.3.ASN.OD1",
"ASX_HYDROXYL.3.ASP.OD1",
"ASX_HYDROXYL.3.ASP.OD2",
"ATPASE_ALPHA_BETA.8.SER.OG",
"ATPASE_C.14.ASP.OD1",
"ATPASE_C.14.ASP.OD2",
"ATPASE_C.14.GLU.OE1",
"ATPASE_C.14.GLU.OE2",
"ATPASE_E1_E2.1.ASP.OD1",
"ATPASE_E1_E2.1.ASP.OD2",
"BACTERIAL_OPSIN_RET.9.LYS.NZ",
"BETA_AMYLASE_1.9.ASP.OD1",
"BETA_AMYLASE_1.9.ASP.OD2",
"BETA_AMYLASE_2.5.GLU.OE1",
"BETA_AMYLASE_2.5.GLU.OE2",
"BETA_ELIM_LYASE.9.LYS.NZ",
"BETA_LACTAMASE_A.5.SER.OG",
"BETA_LACTAMASE_B_2.7.CYS.SG",
"BETA_LACTAMASE_C.5.SER.OG",
"BETA_LACTAMASE_D.3.SER.OG",
"BH4_AAA_HYDROXYL_1.4.HIS.ND1",
"BH4_AAA_HYDROXYL_1.4.HIS.NE2",
"BH4_AAA_HYDROXYL_1.9.HIS.ND1",
"BH4_AAA_HYDROXYL_1.9.HIS.NE2",
"BIOTIN.10.LYS.NZ",
"B_KETOACYL_SYNTHASE.9.CYS.SG",
"BPTI_KUNITZ_1.5.CYS.SG",
"BPTI_KUNITZ_1.9.CYS.SG",
"C5_MTASE_1.8.CYS.SG",
"CADHERIN_1.5.ASP.OD1",
"CADHERIN_1.5.ASP.OD2",
"CADHERIN_1.7.ASN.ND2",
"CADHERIN_1.7.ASN.OD1",
"CADHERIN_1.8.ASP.OD1",
"CADHERIN_1.8.ASP.OD2",
"CARBOXYLESTERASE_B_1.11.SER.OG",
"CARBOXYLESTERASE_B_2.3.CYS.SG",
"CARBOXYPEPT_SER_HIS.10.HIS.ND1",
"CARBOXYPEPT_SER_HIS.10.HIS.NE2",
"CARBOXYPEPT_SER_SER.5.SER.OG",
"CARBOXYPEPT_ZN_1.12.GLU.OE1",
"CARBOXYPEPT_ZN_1.12.GLU.OE2",
"CARBOXYPEPT_ZN_1.9.HIS.ND1",
"CARBOXYPEPT_ZN_1.9.HIS.NE2",
"CARBOXYPEPT_ZN_2.1.HIS.ND1",
"CARBOXYPEPT_ZN_2.1.HIS.NE2",
"CASPASE_CYS.7.GLN.NE2",
"CASPASE_CYS.7.GLN.OE1",
"CAT.4.HIS.ND1",
"CAT.4.HIS.NE2",
"CATALASE_1.5.TYR.OH",
"CATALASE_2.8.HIS.ND1",
"CATALASE_2.8.HIS.NE2",
"CHALCONE_SYNTH.9.CYS.SG",
"CHITINASE_18.9.GLU.OE1",
"CHITINASE_18.9.GLU.OE2",
"CLP_PROTEASE_HIS.8.HIS.ND1",
"CLP_PROTEASE_HIS.8.HIS.NE2",
"CLP_PROTEASE_SER.8.SER.OG",
"COLIPASE_1.1.TYR.OH",
"COLIPASE_1.3.TYR.OH",
"COLIPASE_1.4.TYR.OH",
"COLIPASE_1.6.CYS.SG",
"COLIPASE_1.8.CYS.SG",
"COMPLEX1_24K.10.CYS.SG",
"COMPLEX1_24K.6.CYS.SG",
"COMPLEX1_51K_2.3.CYS.SG",
"COMPLEX1_51K_2.6.CYS.SG",
"COMPLEX1_51K_2.9.CYS.SG",
"COMPLEX1_75K_1.11.CYS.SG",
"COMPLEX1_75K_1.3.CYS.SG",
"COMPLEX1_75K_1.8.CYS.SG",
"COMPLEX1_75K_2.9.CYS.SG",
"CONNEXINS_1.11.CYS.SG",
"CONNEXINS_1.1.CYS.SG",
"CONNEXINS_1.8.CYS.SG",
"COPPER_AMINE_OXID_1.8.TYR.OH",
"COPPER_AMINE_OXID_2.5.HIS.ND1",
"COPPER_AMINE_OXID_2.5.HIS.NE2",
"COX5B_1.4.CYS.SG",
"COX5B_1.6.CYS.SG",
"CRISP_2.4.CYS.SG",
"CU2_MONOOXYGENASE_1.1.HIS.ND1",
"CU2_MONOOXYGENASE_1.1.HIS.NE2",
"CU2_MONOOXYGENASE_1.2.HIS.ND1",
"CU2_MONOOXYGENASE_1.2.HIS.NE2",
"CU2_MONOOXYGENASE_2.1.HIS.ND1",
"CU2_MONOOXYGENASE_2.1.HIS.NE2",
"CU2_MONOOXYGENASE_2.5.HIS.ND1",
"CU2_MONOOXYGENASE_2.5.HIS.NE2",
"CU2_MONOOXYGENASE_2.7.HIS.ND1",
"CU2_MONOOXYGENASE_2.7.HIS.NE2",
"CUTINASE_1.11.SER.OG",
"CYCLOTIDE_MOEBIUS.10.CYS.SG",
"CYCLOTIDE_MOEBIUS.1.CYS.SG",
"CYCLOTIDE_MOEBIUS.5.CYS.SG",
"CYS_MET_METAB_PP.6.THR.OG1",
"CYSTEINE_SWITCH.3.CYS.SG",
"CYTOCHROME_B5_1.5.HIS.ND1",
"CYTOCHROME_B5_1.5.HIS.NE2",
"CYTOCHROME_B559.9.HIS.ND1",
"CYTOCHROME_B559.9.HIS.NE2",
"CYTOCHROME_P450.8.CYS.SG",
"CYTOSOL_AP.3.ASP.OD1",
"CYTOSOL_AP.3.ASP.OD2",
"CYTOSOL_AP.5.GLU.OE1",
"CYTOSOL_AP.5.GLU.OE2",
"D_ALA_DEHYDRATASE.7.LYS.NZ",
"DAO.2.HIS.ND1",
"DAO.2.HIS.NE2",
"DAP_EPIMERASE.7.CYS.SG",
"DDC_GAD_HDC_YDC.6.LYS.NZ",
"DIHYDROOROTASE_1.3.HIS.ND1",
"DIHYDROOROTASE_1.3.HIS.NE2",
"DIHYDROOROTASE_1.5.HIS.ND1",
"DIHYDROOROTASE_1.5.HIS.NE2",
"DNA_LIGASE_N1.1.LYS.NZ",
"DNA_POLYMERASE_X.10.ASP.OD1",
"DNA_POLYMERASE_X.10.ASP.OD2",
"DNA_POLYMERASE_X.12.ASP.OD1",
"DNA_POLYMERASE_X.12.ASP.OD2",
"DNA_POLYMERASE_X.5.ARG.NE",
"DNA_POLYMERASE_X.5.ARG.NH1",
"DNA_POLYMERASE_X.5.ARG.NH2",
"DNASE_I_1.4.HIS.ND1",
"DNASE_I_1.4.HIS.NE2",
"DNASE_I_2.7.CYS.SG",
"EF_HAND_1.11.ASP.OD1",
"EF_HAND_1.11.ASP.OD2",
"EF_HAND_1.11.GLU.OE1",
"EF_HAND_1.11.GLU.OE2",
"EF_HAND_1.1.ASP.OD1",
"EF_HAND_1.1.ASP.OD2",
"EF_HAND_1.3.ASN.ND2",
"EF_HAND_1.3.ASN.OD1",
"EF_HAND_1.3.ASP.OD1",
"EF_HAND_1.3.ASP.OD2",
"EF_HAND_1.3.SER.OG",
"EF_HAND_1.5.ASN.ND2",
"EF_HAND_1.5.ASN.OD1",
"EF_HAND_1.5.ASP.OD1",
"EF_HAND_1.5.ASP.OD2",
"EF_HAND_1.5.GLU.OE1",
"EF_HAND_1.5.GLU.OE2",
"EF_HAND_1.5.SER.OG",
"EF_HAND_1.5.THR.OG1",
"EF_HAND_1.7.ARG.NE",
"EF_HAND_1.7.ARG.NH1",
"EF_HAND_1.7.ARG.NH2",
"EF_HAND_1.7.ASN.ND2",
"EF_HAND_1.7.ASN.OD1",
"EF_HAND_1.7.ASP.OD1",
"EF_HAND_1.7.ASP.OD2",
"EF_HAND_1.7.CYS.SG",
"EF_HAND_1.7.GLN.NE2",
"EF_HAND_1.7.GLN.OE1",
"EF_HAND_1.7.GLU.OE1",
"EF_HAND_1.7.GLU.OE2",
"EF_HAND_1.7.HIS.ND1",
"EF_HAND_1.7.HIS.NE2",
"EF_HAND_1.7.LYS.NZ",
"EF_HAND_1.7.SER.OG",
"EF_HAND_1.7.THR.OG1",
"EF_HAND_1.7.TYR.OH",
"EF_HAND_1.9.ASN.ND2",
"EF_HAND_1.9.ASN.OD1",
"EF_HAND_1.9.ASP.OD1",
"EF_HAND_1.9.ASP.OD2",
"EF_HAND_1.9.CYS.SG",
"EF_HAND_1.9.GLN.NE2",
"EF_HAND_1.9.GLN.OE1",
"EF_HAND_1.9.GLU.OE1",
"EF_HAND_1.9.GLU.OE2",
"EF_HAND_1.9.SER.OG",
"EF_HAND_1.9.THR.OG1",
"EGF_1.10.CYS.SG",
"EGF_1.1.CYS.SG",
"EGF_1.3.CYS.SG",
"ENDONUCLEASE_III_1.10.CYS.SG",
"ENDONUCLEASE_III_1.1.CYS.SG",
"ENDONUCLEASE_III_1.6.CYS.SG",
"ENDONUCLEASE_III_1.8.CYS.SG",
"FERRITIN_1.1.GLU.OE1",
"FERRITIN_1.1.GLU.OE2",
"FERRITIN_1.4.GLU.OE1",
"FERRITIN_1.4.GLU.OE2",
"FERRITIN_1.6.GLU.OE1",
"FERRITIN_1.6.GLU.OE2",
"FERRITIN_2.5.ASP.OD1",
"FERRITIN_2.5.ASP.OD2",
"FERRITIN_2.8.GLU.OE1",
"FERRITIN_2.8.GLU.OE2",
"FIBRINOGEN_C_1.5.CYS.SG",
"FMN_HYDROXY_ACID_DH_1.3.HIS.ND1",
"FMN_HYDROXY_ACID_DH_1.3.HIS.NE2",
"FMN_HYDROXY_ACID_DH_1.6.ARG.NE",
"FMN_HYDROXY_ACID_DH_1.6.ARG.NH1",
"FMN_HYDROXY_ACID_DH_1.6.ARG.NH2",
"FRD_SDH_FAD_BINDING.3.HIS.ND1",
"FRD_SDH_FAD_BINDING.3.HIS.NE2",
"G6P_DEHYDROGENASE.6.LYS.NZ",
"GAPDH.3.CYS.SG",
"GART.12.ASP.OD1",
"GART.12.ASP.OD2",
"GLFV_DEHYDROGENASE.6.LYS.NZ",
"GLNA_ADENYLATION.9.TYR.OH",
"GLUTATHIONE_PEROXID_1.12.CYS.SG",
"GLYCO_HORMONE_ALPHA_1.1.CYS.SG",
"GLYCO_HORMONE_ALPHA_1.4.CYS.SG",
"GLYCO_HORMONE_ALPHA_1.5.CYS.SG",
"GLYCO_HORMONE_ALPHA_2.10.CYS.SG",
"GLYCO_HORMONE_ALPHA_2.5.CYS.SG",
"GLYCO_HORMONE_ALPHA_2.7.CYS.SG",
"GLYCO_HORMONE_BETA_1.1.CYS.SG",
"GLYCO_HORMONE_BETA_1.5.CYS.SG",
"GLYCOPROTEASE.11.HIS.ND1",
"GLYCOPROTEASE.11.HIS.NE2",
"GLYCOPROTEASE.14.HIS.ND1",
"GLYCOPROTEASE.14.HIS.NE2",
"GLYCOSYL_HYDROL_F10.8.GLU.OE1",
"GLYCOSYL_HYDROL_F10.8.GLU.OE2",
"GLYCOSYL_HYDROL_F11_1.4.GLU.OE1",
"GLYCOSYL_HYDROL_F11_1.4.GLU.OE2",
"GLYCOSYL_HYDROL_F11_2.3.GLU.OE1",
"GLYCOSYL_HYDROL_F11_2.3.GLU.OE2",
"GLYCOSYL_HYDROL_F1_1.5.GLU.OE1",
"GLYCOSYL_HYDROL_F1_1.5.GLU.OE2",
"GLYCOSYL_HYDROL_F31_1.5.ASP.OD1",
"GLYCOSYL_HYDROL_F31_1.5.ASP.OD2",
"GLYCOSYL_HYDROL_F3.11.ASP.OD1",
"GLYCOSYL_HYDROL_F3.11.ASP.OD2",
"GLYCOSYL_HYDROL_F32.7.ASP.OD1",
"GLYCOSYL_HYDROL_F32.7.ASP.OD2",
"GLYCOSYL_HYDROL_F39.8.GLU.OE1",
"GLYCOSYL_HYDROL_F39.8.GLU.OE2",
"GLYCOSYL_HYDROL_F5.7.GLU.OE1",
"GLYCOSYL_HYDROL_F5.7.GLU.OE2",
"GLYCOSYL_HYDROL_F6_1.8.ASP.OD1",
"GLYCOSYL_HYDROL_F6_1.8.ASP.OD2",
"GLYCOSYL_HYDROL_F6_1.9.CYS.SG",
"GLYCOSYL_HYDROL_F6_2.7.ASP.OD1",
"GLYCOSYL_HYDROL_F6_2.7.ASP.OD2",
"GLYCOSYL_HYDROL_F8.3.ASP.OD1",
"GLYCOSYL_HYDROL_F8.3.ASP.OD2",
"GLYCOSYL_HYDROL_F9_1.11.HIS.ND1",
"GLYCOSYL_HYDROL_F9_1.11.HIS.NE2",
"GLYCOSYL_HYDROL_F9_2.3.ASP.OD1",
"GLYCOSYL_HYDROL_F9_2.3.ASP.OD2",
"GLYCOSYL_HYDROL_F9_2.7.GLU.OE1",
"GLYCOSYL_HYDROL_F9_2.7.GLU.OE2",
"HEME_OXYGENASE.4.HIS.ND1",
"HEME_OXYGENASE.4.HIS.NE2",
"HEMOCYANIN_1.10.HIS.ND1",
"HEMOCYANIN_1.10.HIS.NE2",
"HIS_ACID_PHOSPHAT_1.8.HIS.ND1",
"HIS_ACID_PHOSPHAT_1.8.HIS.NE2",
"HIS_ACID_PHOSPHAT_2.7.HIS.ND1",
"HIS_ACID_PHOSPHAT_2.7.HIS.NE2",
"HMG_COA_REDUCTASE_3.10.HIS.ND1",
"HMG_COA_REDUCTASE_3.10.HIS.NE2",
"IF5A_HYPUSINE.3.LYS.NZ",
"IG_MHC.3.CYS.SG",
"IMP_DH_GMP_RED.11.CYS.SG",
"INSULIN.11.CYS.SG",
"INSULIN.1.CYS.SG",
"INSULIN.2.CYS.SG",
"INSULIN.6.CYS.SG",
"INTERFERON_A_B_D.10.CYS.SG",
"INTERLEUKIN_10.3.CYS.SG",
"INTERLEUKIN_2.7.CYS.SG",
"INTERLEUKIN_6.1.CYS.SG",
"INTERLEUKIN_6.3.CYS.SG",
"INTRADIOL_DIOXYGENAS.17.TYR.OH",
"IPNS_1.7.CYS.SG",
"IPNS_2.3.CYS.SG",
"ISOCITRATE_LYASE.3.CYS.SG",
"LACTALBUMIN_LYSOZYME_1.10.CYS.SG",
"LACTALBUMIN_LYSOZYME_1.1.CYS.SG",
"LACTALBUMIN_LYSOZYME_1.3.CYS.SG",
"LECTIN_LEGUME_BETA.4.GLU.OE1",
"LECTIN_LEGUME_BETA.4.GLU.OE2",
"LECTIN_LEGUME_BETA.6.ASP.OD1",
"LECTIN_LEGUME_BETA.6.ASP.OD2",
"LIF_OSM.8.CYS.SG",
"LIPASE_SER.7.SER.OG",
"LIPOXYGENASE_1.4.HIS.ND1",
"LIPOXYGENASE_1.4.HIS.NE2",
"LIPOXYGENASE_1.9.HIS.ND1",
"LIPOXYGENASE_1.9.HIS.NE2",
"LIPOYL.13.LYS.NZ",
"L_LDH.4.HIS.ND1",
"L_LDH.4.HIS.NE2",
"MAP_2.15.ASP.OD1",
"MAP_2.15.ASP.OD2",
"MAP_2.6.ASP.OD1",
"MAP_2.6.ASP.OD2",
"MDH.5.ASP.OD1",
"MDH.5.ASP.OD2",
"MDH.7.ARG.NE",
"MDH.7.ARG.NH1",
"MDH.7.ARG.NH2",
"MR_MLE_2.12.GLU.OE1",
"MR_MLE_2.12.GLU.OE2",
"MR_MLE_2.3.ASP.OD1",
"MR_MLE_2.3.ASP.OD2",
"MULTICOPPER_OXIDASE2.1.HIS.ND1",
"MULTICOPPER_OXIDASE2.1.HIS.NE2",
"MULTICOPPER_OXIDASE2.2.CYS.SG",
"MULTICOPPER_OXIDASE2.3.HIS.ND1",
"MULTICOPPER_OXIDASE2.3.HIS.NE2",
"MULTICOPPER_OXIDASE2.5.HIS.ND1",
"MULTICOPPER_OXIDASE2.5.HIS.NE2",
"NATRIURETIC_PEPTIDE.12.CYS.SG",
"NATRIURETIC_PEPTIDE.1.CYS.SG",
"NDP_KINASES.3.HIS.ND1",
"NDP_KINASES.3.HIS.NE2",
"NEUROTR_ION_CHANNEL.12.CYS.SG",
"NEUROTR_ION_CHANNEL.1.CYS.SG",
"NGF_1.12.CYS.SG",
"NGF_1.2.CYS.SG",
"NIFH_FRXC_1.10.CYS.SG",
"NIFH_FRXC_2.8.CYS.SG",
"NI_HGENASE_L_1.12.CYS.SG",
"NI_HGENASE_L_1.9.CYS.SG",
"NIR_SIR.3.CYS.SG",
"NIR_SIR.5.CYS.SG",
"NITROGENASE_1_1.8.CYS.SG",
"NITROGENASE_1_2.3.CYS.SG",
"NUCLEASE_NON_SPEC.4.HIS.ND1",
"NUCLEASE_NON_SPEC.4.HIS.NE2",
"ODR_DC_2_1.4.LYS.NZ",
"OMPDECASE.6.LYS.NZ",
"OPSIN.7.LYS.NZ",
"PA2_ASP.11.CYS.SG",
"PA2_ASP.2.CYS.SG",
"PA2_ASP.4.CYS.SG",
"PA2_ASP.5.ASP.OD1",
"PA2_ASP.5.ASP.OD2",
"PA2_HIS.1.CYS.SG",
"PA2_HIS.2.CYS.SG",
"PA2_HIS.5.HIS.ND1",
"PA2_HIS.5.HIS.NE2",
"PA2_HIS.8.CYS.SG",
"PDGF_1.10.CYS.SG",
"PDGF_1.11.CYS.SG",
"PDGF_1.3.CYS.SG",
"PDGF_1.7.CYS.SG",
"PECTINESTERASE_2.6.ASP.OD1",
"PECTINESTERASE_2.6.ASP.OD2",
"PENTAXIN.3.CYS.SG",
"PEPCK_GTP.5.CYS.SG",
"PEP_ENZYMES_PHOS_SITE.6.HIS.ND1",
"PEP_ENZYMES_PHOS_SITE.6.HIS.NE2",
"PEROXIDASE_1.9.HIS.ND1",
"PEROXIDASE_1.9.HIS.NE2",
"PEROXIDASE_2.9.HIS.ND1",
"PEROXIDASE_2.9.HIS.NE2",
"P_GLUCOSE_ISOMERASE_2.14.LYS.NZ",
"PGM_PMM.7.SER.OG",
"PG_MUTASE.4.HIS.ND1",
"PG_MUTASE.4.HIS.NE2",
"PHOSPHOFRUCTOKINASE.1.ARG.NE",
"PHOSPHOFRUCTOKINASE.1.ARG.NH1",
"PHOSPHOFRUCTOKINASE.1.ARG.NH2",
"PHOSPHOFRUCTOKINASE.1.LYS.NZ",
"PHOSPHOFRUCTOKINASE.4.HIS.ND1",
"PHOSPHOFRUCTOKINASE.4.HIS.NE2",
"PHOSPHOFRUCTOKINASE.7.ARG.NE",
"PHOSPHOFRUCTOKINASE.7.ARG.NH1",
"PHOSPHOFRUCTOKINASE.7.ARG.NH2",
"PHOSPHOFRUCTOKINASE.7.GLN.NE2",
"PHOSPHOFRUCTOKINASE.7.GLN.OE1",
"PHOSPHOPANTETHEINE.6.SER.OG",
"PHOSPHORYLASE.9.LYS.NZ",
"PHOSPHOTRIESTERASE_1.6.HIS.ND1",
"PHOSPHOTRIESTERASE_1.6.HIS.NE2",
"PHOSPHOTRIESTERASE_1.8.HIS.ND1",
"PHOSPHOTRIESTERASE_1.8.HIS.NE2",
"PHOTOSYSTEM_I_PSAAB.10.CYS.SG",
"PHOTOSYSTEM_I_PSAAB.1.CYS.SG",
"PII_GLNB_UMP.6.TYR.OH",
"PLANT_GLOBIN.6.HIS.ND1",
"PLANT_GLOBIN.6.HIS.NE2",
"PP2C.6.ASP.OD1",
"PP2C.6.ASP.OD2",
"PPASE.1.ASP.OD1",
"PPASE.1.ASP.OD2",
"PPASE.3.ASP.OD1",
"PPASE.3.ASP.OD2",
"PPASE.6.ASP.OD1",
"PPASE.6.ASP.OD2",
"PRION_2.13.CYS.SG",
"PRO_ENDOPEP_SER.9.SER.OG",
"PROKAR_ZN_DEPEND_PLPC_1.11.HIS.ND1",
"PROKAR_ZN_DEPEND_PLPC_1.11.HIS.NE2",
"PROKAR_ZN_DEPEND_PLPC_1.1.HIS.ND1",
"PROKAR_ZN_DEPEND_PLPC_1.1.HIS.NE2",
"PROKAR_ZN_DEPEND_PLPC_1.5.ASP.OD1",
"PROKAR_ZN_DEPEND_PLPC_1.5.ASP.OD2",
"PROTEIN_KINASE_ST.5.ASP.OD1",
"PROTEIN_KINASE_ST.5.ASP.OD2",
"PROTEIN_KINASE_TYR.5.ASP.OD1",
"PROTEIN_KINASE_TYR.5.ASP.OD2",
"PRPP_SYNTHASE.15.ASP.OD1",
"PRPP_SYNTHASE.15.ASP.OD2",
"PRPP_SYNTHASE.1.ASP.OD1",
"PRPP_SYNTHASE.1.ASP.OD2",
"PRPP_SYNTHASE.3.HIS.ND1",
"PRPP_SYNTHASE.3.HIS.NE2",
"PTS_EIIA_TYPE_2_HIS.10.HIS.ND1",
"PTS_EIIA_TYPE_2_HIS.10.HIS.NE2",
"PTS_HPR_HIS.3.HIS.ND1",
"PTS_HPR_HIS.3.HIS.NE2",
"PTS_HPR_SER.8.SER.OG",
"PYRASE_CYS.14.CYS.SG",
"PYRASE_GLU.8.GLU.OE1",
"PYRASE_GLU.8.GLU.OE2",
"PYRIDINE_REDOX_1.4.CYS.SG",
"PYRIDINE_REDOX_1.8.CYS.SG",
"PYRUVATE_KINASE.5.LYS.NZ",
"PYRUVATE_KINASE.7.GLU.OE1",
"PYRUVATE_KINASE.7.GLU.OE2",
"REACTION_CENTER.11.HIS.ND1",
"REACTION_CENTER.11.HIS.NE2",
"REACTION_CENTER.5.HIS.ND1",
"REACTION_CENTER.5.HIS.NE2",
"RECEPTOR_TYR_KIN_II.5.TYR.OH",
"RECEPTOR_TYR_KIN_V_1.17.CYS.SG",
"RECEPTOR_TYR_KIN_V_1.7.CYS.SG",
"RECOMBINASES_1.5.SER.OG",
"RNA_POL_N_8KD.6.CYS.SG",
"RNA_POL_N_8KD.9.CYS.SG",
"RNASE_PANCREATIC.1.CYS.SG",
"RNASE_PANCREATIC.2.LYS.NZ",
"RNASE_T2_1.4.HIS.ND1",
"RNASE_T2_1.4.HIS.NE2",
"RNASE_T2_2.11.CYS.SG",
"RNASE_T2_2.8.HIS.ND1",
"RNASE_T2_2.8.HIS.NE2",
"RUBISCO_LARGE.6.LYS.NZ",
"RUBISCO_LARGE.8.ASP.OD1",
"RUBISCO_LARGE.8.ASP.OD2",
"RUBREDOXIN.10.CYS.SG",
"RUBREDOXIN.7.CYS.SG",
"SDH_CYT_1.11.HIS.ND1",
"SDH_CYT_1.11.HIS.NE2",
"SDH_CYT_2.1.HIS.ND1",
"SDH_CYT_2.1.HIS.NE2",
"SHIGA_RICIN.5.GLU.OE1",
"SHIGA_RICIN.5.GLU.OE2",
"SHIGA_RICIN.8.ARG.NE",
"SHIGA_RICIN.8.ARG.NH1",
"SHIGA_RICIN.8.ARG.NH2",
"SHMT.8.HIS.ND1",
"SHMT.8.HIS.NE2",
"SOD_CU_ZN_1.3.HIS.ND1",
"SOD_CU_ZN_1.3.HIS.NE2",
"SOD_CU_ZN_1.5.HIS.ND1",
"SOD_CU_ZN_1.5.HIS.NE2",
"SOD_CU_ZN_2.9.CYS.SG",
"SOD_MN.1.ASP.OD1",
"SOD_MN.1.ASP.OD2",
"SOD_MN.5.HIS.ND1",
"SOD_MN.5.HIS.NE2",
"SOMATOTROPIN_1.1.CYS.SG",
"SOMATOTROPIN_2.16.CYS.SG",
"SOMATOTROPIN_2.1.CYS.SG",
"SPASE_I_1.3.SER.OG",
"SQUASH_INHIBITOR.11.CYS.SG",
"SQUASH_INHIBITOR.13.CYS.SG",
"SQUASH_INHIBITOR.1.CYS.SG",
"SQUASH_INHIBITOR.4.CYS.SG",
"SQUASH_INHIBITOR.9.CYS.SG",
"SUBTILASE_HIS.1.HIS.ND1",
"SUBTILASE_HIS.1.HIS.NE2",
"SUBTILASE_SER.3.SER.OG",
"TGF_BETA_1.11.CYS.SG",
"TGF_BETA_1.7.CYS.SG",
"THIOLASE_1.5.CYS.SG",
"THIOLASE_3.6.CYS.SG",
"THIOL_PROTEASE_ASN.6.ASN.ND2",
"THIOL_PROTEASE_ASN.6.ASN.OD1",
"THIOL_PROTEASE_CYS.7.CYS.SG",
"THIOL_PROTEASE_HIS.3.HIS.ND1",
"THIOL_PROTEASE_HIS.3.HIS.NE2",
"THIONIN.1.CYS.SG",
"THIONIN.2.CYS.SG",
"THIONIN.8.CYS.SG",
"THIOREDOXIN_1.11.CYS.SG",
"THIOREDOXIN_1.8.CYS.SG",
"TIM_1.3.GLU.OE1",
"TIM_1.3.GLU.OE2",
"TIMP.12.CYS.SG",
"TIMP.1.CYS.SG",
"TIMP.3.CYS.SG",
"TISSUE_FACTOR.12.CYS.SG",
"TISSUE_FACTOR.5.CYS.SG",
"TNASE_2.5.ARG.NE",
"TNASE_2.5.ARG.NH1",
"TNASE_2.5.ARG.NH2",
"TRANSGLUTAMINASES.3.CYS.SG",
"TRANSTHYRETIN_1.1.HIS.ND1",
"TRANSTHYRETIN_1.1.HIS.NE2",
"TRANSTHYRETIN_1.1.LYS.NZ",
"TRP_SYNTHASE_ALPHA.2.GLU.OE1",
"TRP_SYNTHASE_ALPHA.2.GLU.OE2",
"TRP_SYNTHASE_BETA.8.LYS.NZ",
"TRYPSIN_HIS.5.HIS.ND1",
"TRYPSIN_HIS.5.HIS.NE2",
"TRYPSIN_SER.6.SER.OG",
"TYROSINASE_2.7.HIS.ND1",
"TYROSINASE_2.7.HIS.NE2",
"TYR_PHOSPHATASE_1.3.CYS.SG",
"UBIQUITIN_ACTIVAT_2.3.CYS.SG",
"UCH_1.5.CYS.SG",
"U_DNA_GLYCOSYLASE.8.ASP.OD1",
"U_DNA_GLYCOSYLASE.8.ASP.OD2",
"UREASE_1.10.HIS.ND1",
"UREASE_1.10.HIS.NE2",
"UREASE_1.8.HIS.ND1",
"UREASE_1.8.HIS.NE2",
"V8_HIS.11.HIS.ND1",
"V8_HIS.11.HIS.NE2",
"V8_SER.5.SER.OG",
"ZINC_PROTEASE.4.HIS.ND1",
"ZINC_PROTEASE.4.HIS.NE2",
"ZINC_PROTEASE.5.GLU.OE1",
"ZINC_PROTEASE.5.GLU.OE2",
"ZINC_PROTEASE.8.HIS.ND1",
"ZINC_PROTEASE.8.HIS.NE2"
)
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