plotGOgraph: plotGOgraph
In aiminy/ModifiedclusterProfiler: statistical analysis and visualization of functional profiles for genes and gene clusters
Description
Usage
Arguments
Value
Author(s)
See Also
Description
plot GO graph
Usage
1
2
plotGOgraph(x, firstSigNodes = 10, useInfo = "all", sigForAll = TRUE,
useFullNames = TRUE, ...)
Arguments
x
output of enrichGO or gseGO
firstSigNodes
number of significant nodes (retangle nodes in the graph)
useInfo
additional info
sigForAll
if TRUE the score/p-value of all nodes in the DAG is shown, otherwise only score will be shown
useFullNames
logical
...
additional parameter of showSigOfNodes, please refer to topGO
Value
GO DAG graph
Author(s)
Guangchuang Yu
See Also
showSigOfNodes
aiminy/ModifiedclusterProfiler documentation built on May 10, 2019, 7:37 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s) See Also
Description
plot GO graph
Usage
1 2 | plotGOgraph(x, firstSigNodes = 10, useInfo = "all", sigForAll = TRUE,
useFullNames = TRUE, ...)
|
Arguments
x |
output of enrichGO or gseGO |
firstSigNodes |
number of significant nodes (retangle nodes in the graph) |
useInfo |
additional info |
sigForAll |
if TRUE the score/p-value of all nodes in the DAG is shown, otherwise only score will be shown |
useFullNames |
logical |
... |
additional parameter of showSigOfNodes, please refer to topGO |
Value
GO DAG graph
Author(s)
Guangchuang Yu
See Also
showSigOfNodes
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.