Files in aiminy/NetPathMiner
NetPathMiner for Biological Network Construction, Path Mining and Visualization

.BBSoptions
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
NEWS
R/NPM-package.R R/dbExtract.R R/netProcess.R R/netWeight.R R/pathClassifier.R R/pathCluster.R R/pathRank.R R/plotPath.R README.md
cleanup
cleanup.win
configure
configure.ac
configure.win
data/ex_biopax.rda
data/ex_kgml_sig.rda
data/ex_microarray.rda
data/ex_sbml.rda
inst/CITATION
inst/extdata/env_data.RData
inst/extdata/hsa00860.xml
inst/extdata/porphyrin.sbml
man/KGML2igraph.Rd man/MIRIAM.Rd man/NPMdefaults.Rd man/NetPathMiner-package.Rd man/SBML2igraph.Rd man/assignEdgeWeights.Rd man/biopax2igraph.Rd man/colorVertexByAttr.Rd man/ex_biopax.Rd man/ex_kgml_sig.Rd man/ex_microarray.Rd man/ex_sbml.Rd man/extractPathNetwork.Rd man/getAttr.Rd man/getGeneSetNetworks.Rd man/getGeneSets.Rd man/getPathsAsEIDs.Rd man/layoutVertexByAttr.Rd man/makeGeneNetwork.Rd man/makeReactionNetwork.Rd man/pathClassifier.Rd man/pathCluster.Rd man/pathRanker.Rd man/pathsToBinary.Rd man/plotAllNetworks.Rd man/plotClassifierROC.Rd man/plotClusters.Rd man/plotCytoscape.Rd man/plotNetwork.Rd man/plotPathClassifier.Rd man/plotPathCluster.Rd man/plotPaths.Rd man/predictPathClassifier.Rd man/predictPathCluster.Rd man/registerMemoryErr.Rd man/rmSmallCompounds.Rd man/samplePaths.Rd man/simplifyReactionNetwork.Rd man/toGraphNEL.Rd man/vertexDeleteReconnect.Rd
src/Makevars.in
src/PathRanker.cpp
src/boost.tar.gz
src/handlesegfault.c
src/handlesegfault.h
src/hme3m.c
src/hme3m.h
src/init.c
src/init.h
src/kgml_interface.cpp
src/methods.cpp
src/pathScope.cpp
src/sbml_interface.cpp
src/sbml_interface.h
vignettes/NPMVignette.Rnw
vignettes/ROCplot.pdf vignettes/example.R
aiminy/NetPathMiner documentation built on May 12, 2019, 3:38 a.m.