make_sample_data.R
In airr-community/ogrdbstats: Analysis of Adaptive Immune Receptor Repertoire Germ Line Statistics
# Make sample data files in the current directory, using data shipped with Tigger
library(tigger)
# Save the sample germline sequences to v_germline_gapped.fasta
writeFasta(SampleGermlineIGHV, 'v_germline_gapped.fasta')
# Save the sample repertoire to repertoire.tsv
write.table(SampleGermlineIGHV, 'rep_genotyped.tsv', sep='\t', row.names=F)
airr-community/ogrdbstats documentation built on Feb. 17, 2025, 5:05 p.m.
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# Make sample data files in the current directory, using data shipped with Tigger
library(tigger)
# Save the sample germline sequences to v_germline_gapped.fasta
writeFasta(SampleGermlineIGHV, 'v_germline_gapped.fasta')
# Save the sample repertoire to repertoire.tsv
write.table(SampleGermlineIGHV, 'rep_genotyped.tsv', sep='\t', row.names=F)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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