plusMinus: Positive and negative associations
In ajrominger/RarePlusComMinus: A package in support of the manuscript ""
Description
Usage
Arguments
Details
Value
Author(s)
Description
Calculate positive and negative associations based on Schoener similarity
Usage
1
plusMinus(x, alpha = 0.05, B = 999)
Arguments
x
site by species matrix (sites as rows, species as columns, abundances in cells)
alpha
the significance level
B
number of replicates for the null model permutations
Details
Faster implementation of the funciton pos.neg.abun.r2d from ((citation))
that also only returns information relevant to testing the association of abundance and
different types of connectivity (plus and minus).
Value
an ncol(x) by ncol(x) matrix of species-species similarities
Author(s)
Andy Rominger <ajrominger@gmail.com>
ajrominger/RarePlusComMinus documentation built on June 27, 2021, 9:25 p.m.
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Description Usage Arguments Details Value Author(s)
Description
Calculate positive and negative associations based on Schoener similarity
Usage
1 | plusMinus(x, alpha = 0.05, B = 999)
|
Arguments
x |
site by species matrix (sites as rows, species as columns, abundances in cells) |
alpha |
the significance level |
B |
number of replicates for the null model permutations |
Details
Faster implementation of the funciton pos.neg.abun.r2d from ((citation))
that also only returns information relevant to testing the association of abundance and
different types of connectivity (plus and minus).
Value
an ncol(x) by ncol(x) matrix of species-species similarities
Author(s)
Andy Rominger <ajrominger@gmail.com>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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