count_within_detail: Compute count within for individual cells in a single field.
In akoyabio/phenoptr: inForm Helper Functions
View source: R/average_counts_rtree.R
Description
Very fast version using rtree::countWithinDistance().
Usage
1
count_within_detail(csd, phenotypes = NULL, radii)
Arguments
csd
Cell seg data.
phenotypes
Optional list of phenotypes to include. If omitted,
will use unique_phenotypes(csd). Counts are from each cell to each
phenotype.
radii
The radius or radii to search within.
akoyabio/phenoptr documentation built on Jan. 7, 2022, 5:37 p.m.
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View source: R/average_counts_rtree.R
Description
Very fast version using rtree::countWithinDistance().
Usage
1 | count_within_detail(csd, phenotypes = NULL, radii)
|
Arguments
csd |
Cell seg data. |
phenotypes |
Optional list of phenotypes to include. If omitted,
will use |
radii |
The radius or radii to search within. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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