count_within_many_impl: Helper function for count_within_batch and count_within_many....

In akoyabio/phenoptr: inForm Helper Functions

Description

Helper function for count_within_batch and count_within_many. This does the actual work of calling count_within multiple times and accumulating the result.

Usage

count_within_many_impl(csd, name, combos, radii, phenotype_rules)

Arguments

csd	Cell seg data for a single field.
name	Name associated with csd, for example the basename of the image file.
combos	List of pairs of (from phenotype name, to phenotype name) and tissue category.
radii	Vector of radii.
phenotype_rules	Named list of phenotype rules.

akoyabio/phenoptr documentation built on Jan. 7, 2022, 5:37 p.m.