RMetSeq: Estimation of the level of methylation
In alekseizarubin/RMetSeq: Restriction Analysis of DNA Methylation
RMetSeq R Documentation
Estimation of the level of methylation
Description
Estimation of the level of methylation
Usage
RMetSeq(bamFiles, GR, tread = 1, duplicate = T)
Arguments
bamFiles
Vector with bam file names
GR
GRanges object with coordinates of restriction sites
tread
The number of running threads at the same time, doesn't work in windows.
duplicate
Remove duplicates
Value
Data frame with the level of methylation and coverage by restriction sites
alekseizarubin/RMetSeq documentation built on May 27, 2023, 12:09 p.m.
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| RMetSeq | R Documentation |
Estimation of the level of methylation
Description
Estimation of the level of methylation
Usage
RMetSeq(bamFiles, GR, tread = 1, duplicate = T)
Arguments
bamFiles |
Vector with bam file names |
GR |
GRanges object with coordinates of restriction sites |
tread |
The number of running threads at the same time, doesn't work in windows. |
duplicate |
Remove duplicates |
Value
Data frame with the level of methylation and coverage by restriction sites
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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