metKitExport: Export results in a format compatible with methylKit
In alekseizarubin/RMetSeq: Restriction Analysis of DNA Methylation
metKitExport R Documentation
Export results in a format compatible with methylKit
Description
Export results in a format compatible with methylKit
Usage
metKitExport(bamFiles, GR, mincov = 30, save_dir = "./", duplicate = T)
Arguments
bamFiles
Vector with bam file names
GR
GRanges object with coordinates of restriction sites
mincov
Minimum coverage.
save_dir
Directory for saving results.
duplicate
Remove duplicates
alekseizarubin/RMetSeq documentation built on May 27, 2023, 12:09 p.m.
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| metKitExport | R Documentation |
Export results in a format compatible with methylKit
Description
Export results in a format compatible with methylKit
Usage
metKitExport(bamFiles, GR, mincov = 30, save_dir = "./", duplicate = T)
Arguments
bamFiles |
Vector with bam file names |
GR |
GRanges object with coordinates of restriction sites |
mincov |
Minimum coverage. |
save_dir |
Directory for saving results. |
duplicate |
Remove duplicates |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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