dev/logOfWhatIveDone.md

In alexholcombe/mixRSVP: Mixture Model Temporal Errors In RSVP Data

• Did use_r("createGuessingDistribution")
• Did use_roxygen_md()
• Did use_data_raw() - this will not be visible to package users I think. Add data creation scripts there, then use_data to create proper package data format.
• Did use_data(P2E2pilot)
• Did use_package('optimx'). Refer to functions with optimx::fun()

The first practical advantage to using a package is that it’s easy to re-load your code. # You can either run devtools::load_all()

• Did use_package('stats') because even though stats automatic, required by CRAN to import non-base stuff and use_package('stats') added it to imports I think. But still build complains that dnorm etc still not defined as global variables and I should "Consider adding importFrom("stats", "dnorm", "pnorm", "runif") to NAMESPACE file" devtools::document() Fixed this by adding the following to the R files so roxygen will do the right thing

' @importFrom stats dnorm pnorm runif

'

NULL

• Did use_testthat()

use_vignette('hist_with_fit') ✔ Adding 'knitr' to Suggests field in DESCRIPTION ✔ Setting VignetteBuilder field in DESCRIPTION to 'knitr' ✔ Adding 'rmarkdown' to Suggests field in DESCRIPTION ✔ Creating 'vignettes/' ✔ Adding '.html', '.R' to 'vignettes/.gitignore' ✔ Adding 'inst/doc' to './.gitignore' ✔ Creating 'vignettes/hist_with_fit.Rmd' ● Modify 'vignettes/hist_with_fit.Rmd'

adding importFrom("methods", "show") importFrom("methods", "show") and ensure that your DESCRIPTION Imports field contains 'methods'). Did that, as explained here to avoid error https://stackoverflow.com/questions/13085481/namespace-dependencies-not-required

alexholcombe/mixRSVP documentation built on June 7, 2019, 3:50 p.m.